Analysis of interatomic Contacts of Structural Units in PDB entry:
3C1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C1Z entry

There are 2 chains in PDB entry 3C1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7THR 355
B
 VAL 7THR 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 3C1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 18Right-handed alpha
Helix 2
2
A
22 35Right-handed alpha
Helix 3
3
A
45 50Right-handed 310
Helix 4
4
A
64 72Right-handed alpha
Helix 5
5
A
106 120Right-handed alpha
Helix 6
6
A
146 181Right-handed alpha
Helix 7
7
A
185 213Right-handed alpha
Helix 8
8
A
214 216Right-handed 310
Helix 9
9
A
217 229Right-handed alpha
Helix 10
10
A
230 243Right-handed alpha
Helix 11
11
A
248 261Right-handed alpha
Helix 12
12
A
266 274Right-handed alpha
Helix 13
13
A
280 287Right-handed 310
Helix 14
14
A
293 300Right-handed alpha
Helix 15
15
A
304 316Right-handed alpha
Helix 16
16
A
317 322Right-handed alpha
Helix 17
17
A
325 331Right-handed alpha
Helix 18
18
A
336 355Right-handed alpha
Helix 19
19
B
8 18Right-handed alpha
Helix 20
20
B
22 35Right-handed alpha
Helix 21
21
B
45 50Right-handed 310
Helix 22
22
B
64 72Right-handed alpha
Helix 23
23
B
106 120Right-handed alpha
Helix 24
24
B
146 181Right-handed alpha
Helix 25
25
B
185 214Right-handed alpha
Helix 26
26
B
217 229Right-handed alpha
Helix 27
27
B
230 243Right-handed alpha
Helix 28
28
B
248 261Right-handed alpha
Helix 29
29
B
266 274Right-handed alpha
Helix 30
30
B
280 287Right-handed 310
Helix 31
31
B
293 300Right-handed alpha
Helix 32
32
B
304 316Right-handed alpha
Helix 33
33
B
317 322Right-handed alpha
Helix 34
34
B
325 331Right-handed alpha
Helix 35
35
B
336 355Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3C1Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
86 94anti-parallel
Strand 3
A
57 62anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
86 94anti-parallel
Strand 3
A
77 81anti-parallel
Strand 4
A
38 43parallel
Strand 5
A
122 126anti-parallel
Strand 6
A
133 137anti-parallel
Strand 7
A
140 144anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
86 94anti-parallel
Strand 3
B
57 62anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
86 94anti-parallel
Strand 3
B
77 81anti-parallel
Strand 4
B
38 43parallel
Strand 5
B
122 126anti-parallel
Strand 6
B
133 137anti-parallel
Strand 7
B
140 144anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il