Analysis of interatomic Contacts of Structural Units in PDB entry:
3C24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C24 entry

There are 2 chains in PDB entry 3C24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5GLY 284
B
 VAL 8GLY 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 3C24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 33Right-handed alpha
Helix 2
2
A
43 53Right-handed alpha
Helix 3
3
A
61 66Right-handed 310
Helix 4
4
A
75 87Right-handed alpha
Helix 5
5
A
88 90Right-handed 310
Helix 6
6
A
101 107Right-handed alpha
Helix 7
7
A
133 138Right-handed alpha
Helix 8
8
A
159 172Right-handed alpha
Helix 9
9
A
182 190Right-handed alpha
Helix 10
10
A
191 196Right-handed alpha
Helix 11
11
A
197 217Right-handed alpha
Helix 12
12
A
219 239Right-handed alpha
Helix 13
13
A
253 262Right-handed alpha
Helix 14
14
A
265 270Right-handed 310
Helix 15
15
A
271 284Right-handed alpha
Helix 16
16
B
23 33Right-handed alpha
Helix 17
17
B
43 52Right-handed alpha
Helix 18
18
B
61 66Right-handed 310
Helix 19
19
B
75 87Right-handed alpha
Helix 20
20
B
88 90Right-handed 310
Helix 21
21
B
101 107Right-handed alpha
Helix 22
22
B
133 138Right-handed alpha
Helix 23
23
B
159 172Right-handed alpha
Helix 24
24
B
182 190Right-handed alpha
Helix 25
25
B
191 197Right-handed alpha
Helix 26
26
B
197 215Right-handed alpha
Helix 27
27
B
219 239Right-handed alpha
Helix 28
28
B
249 262Right-handed alpha
Helix 29
29
B
265 270Right-handed 310
Helix 30
30
B
271 283Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3C24. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
12 16parallel
Strand 3
A
69 72parallel
Strand 4
A
95 98parallel
Strand 5
A
116 122parallel
Strand 6
A
147 155anti-parallel
Strand 7
A
175 180parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
12 16parallel
Strand 3
B
69 72parallel
Strand 4
B
95 98parallel
Strand 5
B
116 122parallel
Strand 6
B
147 155anti-parallel
Strand 7
B
175 180parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il