Analysis of interatomic Contacts of Structural Units in PDB entry:
3C3J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C3J entry

There are 4 chains in PDB entry 3C3J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ALA 384
B
 TYR 5ALA 384
C
 TYR 5GLN 383
D
 TYR 5ASP 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 3C3J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 22Right-handed alpha
Helix 2
2
A
22 50Right-handed alpha
Helix 3
3
A
62 80Right-handed alpha
Helix 4
4
A
87 94Right-handed alpha
Helix 5
5
A
94 99Right-handed alpha
Helix 6
6
A
116 130Right-handed alpha
Helix 7
7
A
144 152Right-handed alpha
Helix 8
8
A
162 166Right-handed 310
Helix 9
9
A
173 188Right-handed alpha
Helix 10
10
A
197 211Right-handed alpha
Helix 11
11
A
234 250Right-handed alpha
Helix 12
12
A
260 265Right-handed alpha
Helix 13
13
A
266 272Right-handed 310
Helix 14
14
A
287 303Right-handed alpha
Helix 15
15
A
316 321Right-handed alpha
Helix 16
16
A
334 357Right-handed alpha
Helix 17
17
B
14 22Right-handed alpha
Helix 18
18
B
22 37Right-handed alpha
Helix 19
19
B
37 50Right-handed alpha
Helix 20
20
B
62 80Right-handed alpha
Helix 21
21
B
87 94Right-handed alpha
Helix 22
22
B
95 98Right-handed 310
Helix 23
23
B
116 130Right-handed alpha
Helix 24
24
B
144 152Right-handed alpha
Helix 25
25
B
162 166Right-handed 310
Helix 26
26
B
173 188Right-handed alpha
Helix 27
27
B
196 211Right-handed alpha
Helix 28
28
B
234 250Right-handed alpha
Helix 29
29
B
260 265Right-handed alpha
Helix 30
30
B
266 272Right-handed 310
Helix 31
31
B
285 303Right-handed alpha
Helix 32
32
B
316 321Right-handed alpha
Helix 33
33
B
334 357Right-handed alpha
Helix 34
34
C
14 22Right-handed alpha
Helix 35
35
C
22 50Right-handed alpha
Helix 36
36
C
61 63Right-handed 310
Helix 37
37
C
64 80Right-handed alpha
Helix 38
38
C
87 94Right-handed alpha
Helix 39
39
C
94 99Right-handed alpha
Helix 40
40
C
116 130Right-handed alpha
Helix 41
41
C
144 152Right-handed alpha
Helix 42
42
C
162 166Right-handed 310
Helix 43
43
C
173 188Right-handed alpha
Helix 44
44
C
196 211Right-handed alpha
Helix 45
45
C
234 250Right-handed alpha
Helix 46
46
C
260 265Right-handed alpha
Helix 47
47
C
266 272Right-handed 310
Helix 48
48
C
285 303Right-handed alpha
Helix 49
49
C
316 321Right-handed alpha
Helix 50
50
C
334 357Right-handed alpha
Helix 51
51
D
14 22Right-handed alpha
Helix 52
52
D
22 37Right-handed alpha
Helix 53
53
D
37 50Right-handed alpha
Helix 54
54
D
61 63Right-handed 310
Helix 55
55
D
64 80Right-handed alpha
Helix 56
56
D
87 94Right-handed alpha
Helix 57
57
D
94 99Right-handed alpha
Helix 58
58
D
116 130Right-handed alpha
Helix 59
59
D
144 153Right-handed alpha
Helix 60
60
D
162 166Right-handed 310
Helix 61
61
D
173 188Right-handed alpha
Helix 62
62
D
196 211Right-handed alpha
Helix 63
63
D
234 250Right-handed alpha
Helix 64
64
D
260 265Right-handed alpha
Helix 65
65
D
266 272Right-handed 310
Helix 66
66
D
287 303Right-handed alpha
Helix 67
67
D
316 321Right-handed alpha
Helix 68
68
D
334 357Right-handed alpha
Helix 69
69
E
14 22Right-handed alpha
Helix 70
70
E
22 50Right-handed alpha
Helix 71
71
E
62 80Right-handed alpha
Helix 72
72
E
87 94Right-handed alpha
Helix 73
73
E
95 98Right-handed 310
Helix 74
74
E
116 130Right-handed alpha
Helix 75
75
E
144 153Right-handed alpha
Helix 76
76
E
162 166Right-handed 310
Helix 77
77
E
173 188Right-handed alpha
Helix 78
78
E
195 211Right-handed alpha
Helix 79
79
E
234 250Right-handed alpha
Helix 80
80
E
260 265Right-handed alpha
Helix 81
81
E
266 272Right-handed 310
Helix 82
82
E
285 303Right-handed alpha
Helix 83
83
E
316 321Right-handed alpha
Helix 84
84
E
334 357Right-handed alpha
Helix 85
85
F
14 22Right-handed alpha
Helix 86
86
F
22 50Right-handed alpha
Helix 87
87
F
61 63Right-handed 310
Helix 88
88
F
64 80Right-handed alpha
Helix 89
89
F
87 94Right-handed alpha
Helix 90
90
F
94 99Right-handed alpha
Helix 91
91
F
116 130Right-handed alpha
Helix 92
92
F
144 152Right-handed alpha
Helix 93
93
F
162 166Right-handed 310
Helix 94
94
F
173 188Right-handed alpha
Helix 95
95
F
196 211Right-handed alpha
Helix 96
96
F
234 250Right-handed alpha
Helix 97
97
F
260 265Right-handed alpha
Helix 98
98
F
266 272Right-handed 310
Helix 99
99
F
285 303Right-handed alpha
Helix 100
100
F
316 321Right-handed alpha
Helix 101
101
F
334 357Right-handed alpha
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There are 17 sheets in PDB entry 3C3J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 85first strand
Strand 2
A
55 59parallel
Strand 3
A
105 111parallel
Strand 4
A
133 139parallel
Strand 5
A
159 160parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 259first strand
Strand 2
A
226 231parallel
Strand 3
A
276 281parallel
Strand 4
A
307 312parallel
Strand 5
A
324 326parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 85first strand
Strand 2
B
55 59parallel
Strand 3
B
105 111parallel
Strand 4
B
133 135parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 85first strand
Strand 2
B
55 59parallel
Strand 3
B
105 111parallel
Strand 4
B
138 139parallel
Strand 5
B
159 160parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 259first strand
Strand 2
B
226 230parallel
Strand 3
B
276 281parallel
Strand 4
B
307 312parallel
Strand 5
B
324 326parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 85first strand
Strand 2
C
55 59parallel
Strand 3
C
105 111parallel
Strand 4
C
133 135parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 85first strand
Strand 2
C
55 59parallel
Strand 3
C
105 111parallel
Strand 4
C
138 139parallel
Strand 5
C
159 160parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
255 259first strand
Strand 2
C
226 230parallel
Strand 3
C
276 281parallel
Strand 4
C
307 312parallel
Strand 5
C
324 326parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 85first strand
Strand 2
D
55 59parallel
Strand 3
D
105 111parallel
Strand 4
D
133 135parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 85first strand
Strand 2
D
55 59parallel
Strand 3
D
105 111parallel
Strand 4
D
138 139parallel
Strand 5
D
159 160parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
255 259first strand
Strand 2
D
226 231parallel
Strand 3
D
276 281parallel
Strand 4
D
307 312parallel
Strand 5
D
324 326parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
82 85first strand
Strand 2
E
55 59parallel
Strand 3
E
105 111parallel
Strand 4
E
133 135parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
82 85first strand
Strand 2
E
55 59parallel
Strand 3
E
105 111parallel
Strand 4
E
138 139parallel
Strand 5
E
159 160parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
255 259first strand
Strand 2
E
226 230parallel
Strand 3
E
276 281parallel
Strand 4
E
307 312parallel
Strand 5
E
324 326parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
82 85first strand
Strand 2
F
55 59parallel
Strand 3
F
105 111parallel
Strand 4
F
133 135parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
82 85first strand
Strand 2
F
55 59parallel
Strand 3
F
105 111parallel
Strand 4
F
138 139parallel
Strand 5
F
159 160parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
255 259first strand
Strand 2
F
226 231parallel
Strand 3
F
276 281parallel
Strand 4
F
307 312parallel
Strand 5
F
324 326parallel
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