Analysis of interatomic Contacts of Structural Units in PDB entry:
3C3L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C3L entry

There are 4 chains in PDB entry 3C3L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 T 4 C 22
D
 T 4 C 22
A
 GLY 11LYS 1099
B
 GLY 11LEU 1095
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are111 helices in PDB entry 3C3L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed alpha
Helix 2
2
A
32 37Right-handed alpha
Helix 3
3
A
53 62Right-handed alpha
Helix 4
4
A
64 72Right-handed alpha
Helix 5
5
A
82 113Right-handed alpha
Helix 6
6
A
115 122Right-handed alpha
Helix 7
7
A
125 129Right-handed 310
Helix 8
8
A
132 136Right-handed 310
Helix 9
9
A
148 170Right-handed alpha
Helix 10
10
A
174 183Right-handed alpha
Helix 11
11
A
185 189Right-handed 310
Helix 12
12
A
190 191Right-handed 310
Helix 13
13
A
192 199Right-handed alpha
Helix 14
14
A
203 218Right-handed alpha
Helix 15
15
A
227 232Right-handed alpha
Helix 16
16
A
232 249Right-handed alpha
Helix 17
17
A
282 287Right-handed 310
Helix 18
18
A
289 296Right-handed alpha
Helix 19
19
A
325 338Right-handed alpha
Helix 20
20
A
343 354Right-handed alpha
Helix 21
21
A
354 363Right-handed alpha
Helix 22
22
A
373 405Right-handed alpha
Helix 23
23
A
407 411Right-handed 310
Helix 24
24
A
436 441Right-handed alpha
Helix 25
25
A
457 471Right-handed alpha
Helix 26
26
A
474 478Right-handed 310
Helix 27
27
A
479 492Right-handed alpha
Helix 28
28
A
495 509Right-handed alpha
Helix 29
29
A
514 524Right-handed alpha
Helix 30
30
A
525 527Right-handed 310
Helix 31
31
A
528 544Right-handed alpha
Helix 32
32
A
546 549Right-handed 310
Helix 33
33
A
562 573Right-handed alpha
Helix 34
34
A
578 587Right-handed alpha
Helix 35
35
A
598 606Right-handed alpha
Helix 36
36
A
610 629Right-handed alpha
Helix 37
37
A
633 651Right-handed alpha
Helix 38
38
A
666 668Right-handed 310
Helix 39
39
A
669 678Right-handed alpha
Helix 40
40
A
681 709Right-handed alpha
Helix 41
41
A
715 722Right-handed alpha
Helix 42
42
A
727 747Right-handed alpha
Helix 43
43
A
778 793Right-handed alpha
Helix 44
44
A
793 806Right-handed alpha
Helix 45
45
A
806 843Right-handed alpha
Helix 46
46
A
855 865Right-handed alpha
Helix 47
47
A
866 870Right-handed 310
Helix 48
48
A
918 928Right-handed alpha
Helix 49
49
A
928 939Right-handed alpha
Helix 50
50
A
959 975Right-handed alpha
Helix 51
51
A
978 992Right-handed alpha
Helix 52
52
A
1000 1012Right-handed alpha
Helix 53
53
A
1013 1018Right-handed 310
Helix 54
54
A
1021 1051Right-handed alpha
Helix 55
55
A
1079 1099Right-handed alpha
Helix 56
56
B
11 16Right-handed alpha
Helix 57
57
B
32 37Right-handed alpha
Helix 58
58
B
53 62Right-handed alpha
Helix 59
59
B
64 73Right-handed alpha
Helix 60
60
B
82 113Right-handed alpha
Helix 61
61
B
115 122Right-handed alpha
Helix 62
62
B
125 129Right-handed 310
Helix 63
63
B
132 136Right-handed 310
Helix 64
64
B
148 166Right-handed alpha
Helix 65
65
B
167 170Right-handed 310
Helix 66
66
B
174 183Right-handed alpha
Helix 67
67
B
185 189Right-handed 310
Helix 68
68
B
192 199Right-handed alpha
Helix 69
69
B
203 219Right-handed alpha
Helix 70
70
B
227 232Right-handed alpha
Helix 71
71
B
232 249Right-handed alpha
Helix 72
72
B
260 262Right-handed 310
Helix 73
73
B
282 287Right-handed 310
Helix 74
74
B
289 296Right-handed alpha
Helix 75
75
B
325 338Right-handed alpha
Helix 76
76
B
343 354Right-handed alpha
Helix 77
77
B
354 363Right-handed alpha
Helix 78
78
B
373 404Right-handed alpha
Helix 79
79
B
407 411Right-handed 310
Helix 80
80
B
436 441Right-handed alpha
Helix 81
81
B
457 471Right-handed alpha
Helix 82
82
B
474 478Right-handed 310
Helix 83
83
B
479 492Right-handed alpha
Helix 84
84
B
495 509Right-handed alpha
Helix 85
85
B
514 524Right-handed alpha
Helix 86
86
B
525 527Right-handed 310
Helix 87
87
B
528 544Right-handed alpha
Helix 88
88
B
546 549Right-handed 310
Helix 89
89
B
562 573Right-handed alpha
Helix 90
90
B
578 587Right-handed alpha
Helix 91
91
B
598 606Right-handed alpha
Helix 92
92
B
610 630Right-handed alpha
Helix 93
93
B
633 651Right-handed alpha
Helix 94
94
B
666 678Right-handed alpha
Helix 95
95
B
681 709Right-handed alpha
Helix 96
96
B
732 747Right-handed alpha
Helix 97
97
B
778 793Right-handed alpha
Helix 98
98
B
793 806Right-handed alpha
Helix 99
99
B
806 843Right-handed alpha
Helix 100
100
B
849 853Right-handed 310
Helix 101
101
B
855 865Right-handed alpha
Helix 102
102
B
866 870Right-handed 310
Helix 103
103
B
918 927Right-handed alpha
Helix 104
104
B
928 937Right-handed alpha
Helix 105
105
B
959 975Right-handed alpha
Helix 106
106
B
978 994Right-handed alpha
Helix 107
107
B
995 999Right-handed 310
Helix 108
108
B
1000 1012Right-handed alpha
Helix 109
109
B
1013 1017Right-handed 310
Helix 110
110
B
1021 1051Right-handed alpha
Helix 111
111
B
1079 1094Right-handed alpha
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There are 30 sheets in PDB entry 3C3L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
221 222anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
144 147anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
269 275anti-parallel
Strand 3
A
252 258anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
413 414anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 316first strand
Strand 2
A
319 323anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
443 444anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 419first strand
Strand 2
A
425 427anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
448 450first strand
Strand 2
A
550 552anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
947 948first strand
Strand 2
A
952 956anti-parallel
Strand 3
A
555 560anti-parallel
Strand 4
A
1060 1061anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 592first strand
Strand 2
A
1055 1057anti-parallel
Strand 3
A
1067 1068anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
654 657first strand
Strand 2
A
661 664anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 753first strand
Strand 2
A
756 761anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
873 874first strand
Strand 2
A
879 880anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
886 887first strand
Strand 2
A
909 910anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
894 896first strand
Strand 2
A
905 906anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
221 222anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 141first strand
Strand 2
B
144 147anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 202first strand
Strand 2
B
269 275anti-parallel
Strand 3
B
252 258anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 305first strand
Strand 2
B
413 414anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
315 316first strand
Strand 2
B
319 323anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 342first strand
Strand 2
B
443 444anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 419first strand
Strand 2
B
425 427anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 450first strand
Strand 2
B
550 552anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
947 948first strand
Strand 2
B
952 956anti-parallel
Strand 3
B
555 560anti-parallel
Strand 4
B
1060 1061anti-parallel
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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
590 592first strand
Strand 2
B
1055 1057anti-parallel
Strand 3
B
1067 1068anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
655 656first strand
Strand 2
B
662 663anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
748 753first strand
Strand 2
B
756 761anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
873 874first strand
Strand 2
B
879 880anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
884 887first strand
Strand 2
B
909 912anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
894 896first strand
Strand 2
B
905 906anti-parallel
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