Analysis of interatomic Contacts of Structural Units in PDB entry:
3C5V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C5V entry

There is 1 chain in PDB entry 3C5V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 39ILE 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3C5V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed 310
Helix 2
2
A
88 91Right-handed 310
Helix 3
3
A
92 101Right-handed alpha
Helix 4
4
A
127 144Right-handed alpha
Helix 5
5
A
156 168Right-handed alpha
Helix 6
6
A
183 201Right-handed alpha
Helix 7
7
A
207 218Right-handed alpha
Helix 8
8
A
223 234Right-handed alpha
Helix 9
9
A
290 293Right-handed 310
Helix 10
10
A
294 303Right-handed alpha
Helix 11
11
A
304 312Right-handed alpha
Helix 12
12
A
327 336Right-handed alpha
Helix 13
13
A
350 355Right-handed alpha
Helix 14
14
A
355 370Right-handed alpha
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There are 2 sheets in PDB entry 3C5V. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 60first strand
Strand 2
A
63 72anti-parallel
Strand 3
A
106 110anti-parallel
Strand 4
A
78 82parallel
Strand 5
A
150 155parallel
Strand 6
A
174 180parallel
Strand 7
A
316 320parallel
Strand 8
A
340 343parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 237first strand
Strand 2
A
285 287anti-parallel
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