Analysis of interatomic Contacts of Structural Units in PDB entry:
3C7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C7J entry

There are 2 chains in PDB entry 3C7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2VAL 234
B
 SER -2GLN 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3C7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 15Right-handed alpha
Helix 2
2
A
20 22Right-handed 310
Helix 3
3
A
23 38Right-handed alpha
Helix 4
4
A
48 57Right-handed alpha
Helix 5
5
A
59 73Right-handed alpha
Helix 6
6
A
89 113Right-handed alpha
Helix 7
7
A
114 116Right-handed 310
Helix 8
8
A
117 134Right-handed alpha
Helix 9
9
A
136 152Right-handed alpha
Helix 10
10
A
157 183Right-handed alpha
Helix 11
11
A
189 201Right-handed alpha
Helix 12
12
A
203 232Right-handed alpha
Helix 13
13
B
-1 15Right-handed alpha
Helix 14
14
B
20 22Right-handed 310
Helix 15
15
B
23 38Right-handed alpha
Helix 16
16
B
48 57Right-handed alpha
Helix 17
17
B
59 73Right-handed alpha
Helix 18
18
B
91 113Right-handed alpha
Helix 19
19
B
114 116Right-handed 310
Helix 20
20
B
117 134Right-handed alpha
Helix 21
21
B
136 152Right-handed alpha
Helix 22
22
B
157 179Right-handed alpha
Helix 23
23
B
189 201Right-handed alpha
Helix 24
24
B
203 229Right-handed alpha
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There are 2 sheets in PDB entry 3C7J. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
83 86anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 79first strand
Strand 2
B
83 86anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il