Analysis of interatomic Contacts of Structural Units in PDB entry:
3C8F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C8F entry

There is 1 chain in PDB entry 3C8F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1PHE 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3C8F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 42Right-handed 310
Helix 2
2
A
51 60Right-handed alpha
Helix 3
3
A
62 67Right-handed alpha
Helix 4
4
A
79 82Right-handed 310
Helix 5
5
A
83 96Right-handed alpha
Helix 6
6
A
113 122Right-handed alpha
Helix 7
7
A
134 143Right-handed alpha
Helix 8
8
A
146 160Right-handed alpha
Helix 9
9
A
176 191Right-handed alpha
Helix 10
10
A
205 212Right-handed alpha
Helix 11
11
A
225 238Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3C8F.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
4 13anti-parallel
Strand 3
A
20 26anti-parallel
Strand 4
A
72 77parallel
Strand 5
A
101 105parallel
Strand 6
A
125 129parallel
Strand 7
A
163 169parallel
Strand 8
A
193 200parallel
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