Analysis of interatomic Contacts of Structural Units in PDB entry:
3CC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CC1 entry

There are 2 chains in PDB entry 3CC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ARG 432
B
 GLY 0ASP 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3CC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 22Right-handed alpha
Helix 2
2
A
26 41Right-handed alpha
Helix 3
3
A
42 45Right-handed 310
Helix 4
4
A
86 90Right-handed 310
Helix 5
5
A
95 105Right-handed alpha
Helix 6
6
A
119 125Right-handed alpha
Helix 7
7
A
134 138Right-handed alpha
Helix 8
8
A
160 175Right-handed alpha
Helix 9
9
A
194 208Right-handed alpha
Helix 10
10
A
233 237Right-handed 310
Helix 11
11
A
245 262Right-handed alpha
Helix 12
12
A
296 310Right-handed alpha
Helix 13
13
A
319 323Right-handed 310
Helix 14
14
A
324 332Right-handed alpha
Helix 15
15
A
333 343Right-handed alpha
Helix 16
16
A
384 388Right-handed 310
Helix 17
17
B
17 22Right-handed alpha
Helix 18
18
B
26 41Right-handed alpha
Helix 19
19
B
42 45Right-handed 310
Helix 20
20
B
86 90Right-handed 310
Helix 21
21
B
95 105Right-handed alpha
Helix 22
22
B
119 125Right-handed alpha
Helix 23
23
B
134 138Right-handed alpha
Helix 24
24
B
160 175Right-handed alpha
Helix 25
25
B
194 207Right-handed alpha
Helix 26
26
B
245 261Right-handed alpha
Helix 27
27
B
296 311Right-handed alpha
Helix 28
28
B
319 323Right-handed 310
Helix 29
29
B
324 332Right-handed alpha
Helix 30
30
B
333 343Right-handed alpha
Helix 31
31
B
384 388Right-handed 310
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There are 11 sheets in PDB entry 3CC1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 215first strand
Strand 2
A
179 183parallel
Strand 3
A
108 114parallel
Strand 4
A
48 51parallel
Strand 5
A
13 16parallel
Strand 6
A
314 316parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
151 154anti-parallel
Strand 3
A
139 140anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
239 240anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 279first strand
Strand 2
A
291 292anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 352first strand
Strand 2
A
355 361anti-parallel
Strand 3
A
367 373anti-parallel
Strand 4
A
423 430anti-parallel
Strand 5
A
394 398anti-parallel
Strand 6
A
403 408anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 383first strand
Strand 2
A
414 418anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 215first strand
Strand 2
B
179 183parallel
Strand 3
B
108 114parallel
Strand 4
B
48 51parallel
Strand 5
B
13 16parallel
Strand 6
B
314 316parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 118first strand
Strand 2
B
151 154anti-parallel
Strand 3
B
139 140anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 279first strand
Strand 2
B
291 292anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 352first strand
Strand 2
B
355 361anti-parallel
Strand 3
B
367 373anti-parallel
Strand 4
B
423 430anti-parallel
Strand 5
B
394 398anti-parallel
Strand 6
B
404 408anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
379 383first strand
Strand 2
B
414 418anti-parallel
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