Analysis of interatomic Contacts of Structural Units in PDB entry:
3CDL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CDL entry

There are 2 chains in PDB entry 3CDL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3PRO 199
B
 LEU 3GLY 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3CDL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 23Right-handed alpha
Helix 2
2
A
28 36Right-handed alpha
Helix 3
3
A
39 45Right-handed alpha
Helix 4
4
A
49 64Right-handed alpha
Helix 5
5
A
78 95Right-handed alpha
Helix 6
6
A
96 112Right-handed alpha
Helix 7
7
A
113 118Right-handed alpha
Helix 8
8
A
128 141Right-handed alpha
Helix 9
9
A
148 165Right-handed alpha
Helix 10
10
A
165 172Right-handed alpha
Helix 11
11
A
177 197Right-handed alpha
Helix 12
12
B
5 22Right-handed alpha
Helix 13
13
B
28 37Right-handed alpha
Helix 14
14
B
39 47Right-handed alpha
Helix 15
15
B
49 62Right-handed alpha
Helix 16
16
B
78 95Right-handed alpha
Helix 17
17
B
96 112Right-handed alpha
Helix 18
18
B
113 123Right-handed alpha
Helix 19
19
B
129 141Right-handed alpha
Helix 20
20
B
148 165Right-handed alpha
Helix 21
21
B
165 172Right-handed alpha
Helix 22
22
B
177 197Right-handed alpha
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There are no sheets in PDB entry 3CDL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il