Analysis of interatomic Contacts of Structural Units in PDB entry:
3CF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CF1 entry

There are 3 chains in PDB entry 3CF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 21GLN 763
B
 ASN 21GLN 763
C
 ASN 21GLN 763
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are104 helices in PDB entry 3CF1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 47Right-handed alpha
Helix 2
2
A
48 50Right-handed 310
Helix 3
3
A
85 91Right-handed alpha
Helix 4
4
A
120 123Right-handed 310
Helix 5
5
A
129 134Right-handed alpha
Helix 6
6
A
134 139Right-handed alpha
Helix 7
7
A
202 206Right-handed 310
Helix 8
8
A
209 221Right-handed alpha
Helix 9
9
A
250 263Right-handed alpha
Helix 10
10
A
272 277Right-handed alpha
Helix 11
11
A
280 296Right-handed alpha
Helix 12
12
A
305 309Right-handed 310
Helix 13
13
A
318 333Right-handed alpha
Helix 14
14
A
354 358Right-handed 310
Helix 15
15
A
373 385Right-handed alpha
Helix 16
16
A
395 401Right-handed alpha
Helix 17
17
A
409 431Right-handed alpha
Helix 18
18
A
438 445Right-handed alpha
Helix 19
19
A
448 459Right-handed alpha
Helix 20
20
A
482 494Right-handed alpha
Helix 21
21
A
494 499Right-handed alpha
Helix 22
22
A
499 507Right-handed alpha
Helix 23
23
A
523 535Right-handed alpha
Helix 24
24
A
543 552Right-handed alpha
Helix 25
25
A
556 566Right-handed alpha
Helix 26
26
A
580 586Right-handed alpha
Helix 27
27
A
598 610Right-handed alpha
Helix 28
28
A
625 629Right-handed 310
Helix 29
29
A
630 634Right-handed 310
Helix 30
30
A
649 661Right-handed alpha
Helix 31
31
A
671 676Right-handed alpha
Helix 32
32
A
683 696Right-handed alpha
Helix 33
33
A
697 707Right-handed alpha
Helix 34
34
A
732 741Right-handed alpha
Helix 35
35
A
748 763Right-handed alpha
Helix 36
36
B
42 47Right-handed alpha
Helix 37
37
B
48 50Right-handed 310
Helix 38
38
B
85 91Right-handed alpha
Helix 39
39
B
120 123Right-handed 310
Helix 40
40
B
129 134Right-handed alpha
Helix 41
41
B
134 139Right-handed alpha
Helix 42
42
B
202 206Right-handed 310
Helix 43
43
B
209 221Right-handed alpha
Helix 44
44
B
250 263Right-handed alpha
Helix 45
45
B
272 277Right-handed alpha
Helix 46
46
B
280 296Right-handed alpha
Helix 47
47
B
305 309Right-handed 310
Helix 48
48
B
318 333Right-handed alpha
Helix 49
49
B
354 358Right-handed 310
Helix 50
50
B
373 385Right-handed alpha
Helix 51
51
B
395 401Right-handed alpha
Helix 52
52
B
409 431Right-handed alpha
Helix 53
53
B
438 445Right-handed alpha
Helix 54
54
B
448 459Right-handed alpha
Helix 55
55
B
482 499Right-handed alpha
Helix 56
56
B
501 507Right-handed alpha
Helix 57
57
B
523 535Right-handed alpha
Helix 58
58
B
543 552Right-handed alpha
Helix 59
59
B
556 568Right-handed alpha
Helix 60
60
B
580 586Right-handed alpha
Helix 61
61
B
598 610Right-handed alpha
Helix 62
62
B
625 629Right-handed 310
Helix 63
63
B
630 634Right-handed 310
Helix 64
64
B
649 661Right-handed alpha
Helix 65
65
B
671 676Right-handed alpha
Helix 66
66
B
683 696Right-handed alpha
Helix 67
67
B
697 707Right-handed alpha
Helix 68
68
B
732 741Right-handed alpha
Helix 69
69
B
748 763Right-handed alpha
Helix 70
70
C
42 47Right-handed alpha
Helix 71
71
C
48 50Right-handed 310
Helix 72
72
C
85 91Right-handed alpha
Helix 73
73
C
120 123Right-handed 310
Helix 74
74
C
129 134Right-handed alpha
Helix 75
75
C
134 139Right-handed alpha
Helix 76
76
C
202 206Right-handed 310
Helix 77
77
C
209 221Right-handed alpha
Helix 78
78
C
250 263Right-handed alpha
Helix 79
79
C
272 277Right-handed alpha
Helix 80
80
C
280 296Right-handed alpha
Helix 81
81
C
305 309Right-handed 310
Helix 82
82
C
318 333Right-handed alpha
Helix 83
83
C
354 358Right-handed 310
Helix 84
84
C
373 385Right-handed alpha
Helix 85
85
C
395 401Right-handed alpha
Helix 86
86
C
409 430Right-handed alpha
Helix 87
87
C
439 445Right-handed alpha
Helix 88
88
C
448 459Right-handed alpha
Helix 89
89
C
482 499Right-handed alpha
Helix 90
90
C
499 505Right-handed alpha
Helix 91
91
C
523 535Right-handed alpha
Helix 92
92
C
543 552Right-handed alpha
Helix 93
93
C
556 563Right-handed alpha
Helix 94
94
C
578 581Right-handed 310
Helix 95
95
C
582 587Right-handed alpha
Helix 96
96
C
598 610Right-handed alpha
Helix 97
97
C
625 629Right-handed 310
Helix 98
98
C
630 634Right-handed 310
Helix 99
99
C
651 661Right-handed alpha
Helix 100
100
C
671 676Right-handed alpha
Helix 101
101
C
683 696Right-handed alpha
Helix 102
102
C
697 707Right-handed alpha
Helix 103
103
C
732 741Right-handed alpha
Helix 104
104
C
748 763Right-handed alpha
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There are 17 sheets in PDB entry 3CF1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
82 83parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 156first strand
Strand 2
A
159 167anti-parallel
Strand 3
A
113 118anti-parallel
Strand 4
A
181 183parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
173 175anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 270first strand
Strand 2
A
299 304parallel
Strand 3
A
343 346parallel
Strand 4
A
240 243parallel
Strand 5
A
365 367parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 541first strand
Strand 2
A
572 576parallel
Strand 3
A
618 623parallel
Strand 4
A
514 517parallel
Strand 5
A
641 644parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
82 83parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 61first strand
Strand 2
B
65 67anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 156first strand
Strand 2
B
159 167anti-parallel
Strand 3
B
113 118anti-parallel
Strand 4
B
181 183parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 270first strand
Strand 2
B
299 304parallel
Strand 3
B
343 346parallel
Strand 4
B
240 243parallel
Strand 5
B
365 367parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
538 541first strand
Strand 2
B
572 577parallel
Strand 3
B
618 623parallel
Strand 4
B
514 517parallel
Strand 5
B
641 644parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 29first strand
Strand 2
C
82 83parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
65 67anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
153 156first strand
Strand 2
C
159 167anti-parallel
Strand 3
C
113 118anti-parallel
Strand 4
C
181 183parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 127first strand
Strand 2
C
437 438parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 147first strand
Strand 2
C
173 175anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
265 270first strand
Strand 2
C
299 304parallel
Strand 3
C
342 346parallel
Strand 4
C
240 243parallel
Strand 5
C
365 367parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
538 541first strand
Strand 2
C
572 575parallel
Strand 3
C
618 623parallel
Strand 4
C
514 517parallel
Strand 5
C
641 644parallel
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