Analysis of interatomic Contacts of Structural Units in PDB entry:
3CF3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CF3 entry

There are 3 chains in PDB entry 3CF3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 21GLN 763
B
 ASN 21GLN 763
C
 ASN 21GLN 763
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 3CF3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
85 93Right-handed alpha
Helix 2
2
A
120 123Right-handed 310
Helix 3
3
A
129 134Right-handed alpha
Helix 4
4
A
134 140Right-handed alpha
Helix 5
5
A
202 206Right-handed 310
Helix 6
6
A
209 226Right-handed alpha
Helix 7
7
A
226 233Right-handed alpha
Helix 8
8
A
250 261Right-handed alpha
Helix 9
9
A
270 275Right-handed alpha
Helix 10
10
A
281 296Right-handed alpha
Helix 11
11
A
306 310Right-handed alpha
Helix 12
12
A
318 333Right-handed alpha
Helix 13
13
A
354 359Right-handed 310
Helix 14
14
A
373 384Right-handed alpha
Helix 15
15
A
395 401Right-handed alpha
Helix 16
16
A
407 420Right-handed alpha
Helix 17
17
A
426 431Right-handed alpha
Helix 18
18
A
438 445Right-handed alpha
Helix 19
19
A
448 457Right-handed alpha
Helix 20
20
A
475 479Right-handed 310
Helix 21
21
A
482 499Right-handed alpha
Helix 22
22
A
501 507Right-handed alpha
Helix 23
23
A
523 535Right-handed alpha
Helix 24
24
A
543 554Right-handed alpha
Helix 25
25
A
557 568Right-handed alpha
Helix 26
26
A
580 587Right-handed alpha
Helix 27
27
A
598 611Right-handed alpha
Helix 28
28
A
625 629Right-handed 310
Helix 29
29
A
649 660Right-handed alpha
Helix 30
30
A
671 676Right-handed alpha
Helix 31
31
A
683 707Right-handed alpha
Helix 32
32
A
732 740Right-handed alpha
Helix 33
33
A
748 762Right-handed alpha
Helix 34
34
B
85 93Right-handed alpha
Helix 35
35
B
120 123Right-handed 310
Helix 36
36
B
129 134Right-handed alpha
Helix 37
37
B
134 140Right-handed alpha
Helix 38
38
B
202 206Right-handed 310
Helix 39
39
B
209 226Right-handed alpha
Helix 40
40
B
226 233Right-handed alpha
Helix 41
41
B
250 261Right-handed alpha
Helix 42
42
B
270 275Right-handed alpha
Helix 43
43
B
281 296Right-handed alpha
Helix 44
44
B
306 310Right-handed alpha
Helix 45
45
B
318 333Right-handed alpha
Helix 46
46
B
354 359Right-handed 310
Helix 47
47
B
373 384Right-handed alpha
Helix 48
48
B
395 401Right-handed alpha
Helix 49
49
B
407 420Right-handed alpha
Helix 50
50
B
426 431Right-handed alpha
Helix 51
51
B
438 445Right-handed alpha
Helix 52
52
B
448 457Right-handed alpha
Helix 53
53
B
475 479Right-handed 310
Helix 54
54
B
482 499Right-handed alpha
Helix 55
55
B
501 506Right-handed alpha
Helix 56
56
B
523 535Right-handed alpha
Helix 57
57
B
543 554Right-handed alpha
Helix 58
58
B
557 568Right-handed alpha
Helix 59
59
B
580 587Right-handed alpha
Helix 60
60
B
598 611Right-handed alpha
Helix 61
61
B
625 629Right-handed 310
Helix 62
62
B
649 660Right-handed alpha
Helix 63
63
B
671 676Right-handed alpha
Helix 64
64
B
683 707Right-handed alpha
Helix 65
65
B
732 740Right-handed alpha
Helix 66
66
B
748 762Right-handed alpha
Helix 67
67
C
85 93Right-handed alpha
Helix 68
68
C
120 123Right-handed 310
Helix 69
69
C
129 134Right-handed alpha
Helix 70
70
C
134 140Right-handed alpha
Helix 71
71
C
202 206Right-handed 310
Helix 72
72
C
209 226Right-handed alpha
Helix 73
73
C
226 233Right-handed alpha
Helix 74
74
C
250 261Right-handed alpha
Helix 75
75
C
270 275Right-handed alpha
Helix 76
76
C
281 296Right-handed alpha
Helix 77
77
C
307 309Right-handed 310
Helix 78
78
C
318 333Right-handed alpha
Helix 79
79
C
354 359Right-handed 310
Helix 80
80
C
373 384Right-handed alpha
Helix 81
81
C
395 401Right-handed alpha
Helix 82
82
C
407 420Right-handed alpha
Helix 83
83
C
426 431Right-handed alpha
Helix 84
84
C
438 445Right-handed alpha
Helix 85
85
C
448 457Right-handed alpha
Helix 86
86
C
475 479Right-handed 310
Helix 87
87
C
482 499Right-handed alpha
Helix 88
88
C
501 506Right-handed alpha
Helix 89
89
C
523 535Right-handed alpha
Helix 90
90
C
543 554Right-handed alpha
Helix 91
91
C
557 568Right-handed alpha
Helix 92
92
C
580 586Right-handed alpha
Helix 93
93
C
598 611Right-handed alpha
Helix 94
94
C
625 629Right-handed 310
Helix 95
95
C
649 660Right-handed alpha
Helix 96
96
C
671 676Right-handed alpha
Helix 97
97
C
683 707Right-handed alpha
Helix 98
98
C
732 740Right-handed alpha
Helix 99
99
C
748 762Right-handed alpha
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There are 18 sheets in PDB entry 3CF3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
25 29parallel
Strand 3
A
99 101anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
66 73parallel
Strand 3
A
56 60anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 155first strand
Strand 2
A
160 168anti-parallel
Strand 3
A
113 118anti-parallel
Strand 4
A
181 183parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
A
173 176anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 269first strand
Strand 2
A
299 305parallel
Strand 3
A
341 346parallel
Strand 4
A
240 243parallel
Strand 5
A
365 367parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 542first strand
Strand 2
A
572 576parallel
Strand 3
A
617 623parallel
Strand 4
A
513 517parallel
Strand 5
A
641 644parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 83first strand
Strand 2
B
25 29parallel
Strand 3
B
99 101anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 41first strand
Strand 2
B
65 73parallel
Strand 3
B
56 61anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 155first strand
Strand 2
B
160 168anti-parallel
Strand 3
B
113 118anti-parallel
Strand 4
B
181 183parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 147first strand
Strand 2
B
173 176anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 269first strand
Strand 2
B
299 305parallel
Strand 3
B
341 346parallel
Strand 4
B
240 243parallel
Strand 5
B
365 367parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
538 542first strand
Strand 2
B
572 576parallel
Strand 3
B
619 623parallel
Strand 4
B
513 517parallel
Strand 5
B
641 644parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 83first strand
Strand 2
C
25 29parallel
Strand 3
C
99 101anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 41first strand
Strand 2
C
65 73parallel
Strand 3
C
56 61anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
151 155first strand
Strand 2
C
160 168anti-parallel
Strand 3
C
113 118anti-parallel
Strand 4
C
181 183parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 147first strand
Strand 2
C
173 176anti-parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
265 269first strand
Strand 2
C
299 305parallel
Strand 3
C
341 346parallel
Strand 4
C
240 243parallel
Strand 5
C
365 367parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
538 542first strand
Strand 2
C
572 576parallel
Strand 3
C
617 623parallel
Strand 4
C
513 517parallel
Strand 5
C
641 644parallel
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