Analysis of interatomic Contacts of Structural Units in PDB entry:
3CFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CFZ entry

There is 1 chain in PDB entry 3CFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 37ILE 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3CFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 63Right-handed alpha
Helix 2
2
A
74 84Right-handed alpha
Helix 3
3
A
98 104Right-handed alpha
Helix 4
4
A
138 143Right-handed alpha
Helix 5
5
A
158 176Right-handed alpha
Helix 6
6
A
179 185Right-handed alpha
Helix 7
7
A
186 189Right-handed 310
Helix 8
8
A
220 223Right-handed 310
Helix 9
9
A
224 230Right-handed alpha
Helix 10
10
A
240 246Right-handed alpha
Helix 11
11
A
261 263Right-handed 310
Helix 12
12
A
264 269Right-handed alpha
Helix 13
13
A
277 279Right-handed 310
Helix 14
14
A
299 313Right-handed alpha
Helix 15
15
A
314 319Right-handed alpha
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There are 3 sheets in PDB entry 3CFZ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 73first strand
Strand 2
A
38 45parallel
Strand 3
A
91 94parallel
Strand 4
A
288 292anti-parallel
Strand 5
A
113 117anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 218first strand
Strand 2
A
150 153parallel
Strand 3
A
235 239parallel
Strand 4
A
120 124anti-parallel
Strand 5
A
249 251anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 196first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
271 275parallel
Strand 4
A
280 283anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il