Analysis of interatomic Contacts of Structural Units in PDB entry:
3CGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CGH entry

There is 1 chain in PDB entry 3CGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 31LYS 537
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 3CGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 53Right-handed alpha
Helix 2
2
A
59 68Right-handed alpha
Helix 3
3
A
70 75Right-handed alpha
Helix 4
4
A
95 100Right-handed alpha
Helix 5
5
A
100 105Right-handed alpha
Helix 6
6
A
108 126Right-handed alpha
Helix 7
7
A
129 151Right-handed alpha
Helix 8
8
A
170 192Right-handed alpha
Helix 9
9
A
198 202Right-handed 310
Helix 10
10
A
208 227Right-handed alpha
Helix 11
11
A
231 244Right-handed alpha
Helix 12
12
A
245 248Right-handed 310
Helix 13
13
A
253 257Right-handed 310
Helix 14
14
A
268 276Right-handed alpha
Helix 15
15
A
280 284Right-handed 310
Helix 16
16
A
298 308Right-handed alpha
Helix 17
17
A
312 317Right-handed alpha
Helix 18
18
A
342 346Right-handed 310
Helix 19
19
A
361 377Right-handed alpha
Helix 20
20
A
383 400Right-handed alpha
Helix 21
21
A
403 409Right-handed alpha
Helix 22
22
A
443 459Right-handed alpha
Helix 23
23
A
462 474Right-handed alpha
Helix 24
24
A
504 509Right-handed alpha
Helix 25
25
A
509 520Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3CGH. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
295 297anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
357 360anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il