Analysis of interatomic Contacts of Structural Units in PDB entry:
3CGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CGW entry

There is 1 chain in PDB entry 3CGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PHE 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3CGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 18Right-handed alpha
Helix 2
2
A
22 25Right-handed 310
Helix 3
3
A
44 55Right-handed alpha
Helix 4
4
A
71 80Right-handed alpha
Helix 5
5
A
89 105Right-handed alpha
Helix 6
6
A
108 121Right-handed alpha
Helix 7
7
A
147 152Right-handed alpha
Helix 8
8
A
174 181Right-handed alpha
Helix 9
9
A
197 204Right-handed alpha
Helix 10
10
A
206 212Right-handed alpha
Helix 11
11
A
244 252Right-handed alpha
Helix 12
12
A
268 274Right-handed alpha
Helix 13
13
A
288 302Right-handed alpha
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There are 3 sheets in PDB entry 3CGW. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
27 30parallel
Strand 3
A
2 5parallel
Strand 4
A
186 189parallel
Strand 5
A
215 219parallel
Strand 6
A
256 261parallel
Strand 7
A
278 281parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
41 43anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
135 139anti-parallel
Strand 3
A
162 166anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il