Analysis of interatomic Contacts of Structural Units in PDB entry:
3CI0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CI0 entry

There are 3 chains in PDB entry 3CI0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 GLN 31ALA 114
J
 GLN 39GLN 192
K
 GLY 29SER 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3CI0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
I
31 54Right-handed alpha
Helix 2
2
I
55 60Right-handed alpha
Helix 3
3
J
39 56Right-handed alpha
Helix 4
4
J
80 83Right-handed 310
Helix 5
5
K
29 60Right-handed alpha
Helix 6
6
K
69 73Right-handed 310
Helix 7
7
K
99 103Right-handed 310
Helix 8
8
K
110 122Right-handed alpha
Helix 9
9
K
126 142Right-handed alpha
Helix 10
10
K
154 160Right-handed alpha
Helix 11
11
K
174 181Right-handed 310
Helix 12
12
K
185 193Right-handed alpha
Helix 13
13
K
212 215Right-handed 310
Helix 14
14
K
216 223Right-handed alpha
Helix 15
15
K
233 238Right-handed alpha
Helix 16
16
K
246 252Right-handed alpha
Helix 17
17
K
253 257Right-handed 310
Helix 18
18
K
260 270Right-handed alpha
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There are 7 sheets in PDB entry 3CI0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
63 69first strand
Strand 2
I
72 81anti-parallel
Strand 3
I
89 96anti-parallel
Strand 4
I
104 112anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
63 64first strand
Strand 2
J
70 71anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
75 78first strand
Strand 2
J
86 92anti-parallel
Strand 3
J
108 115anti-parallel
Strand 4
J
118 124anti-parallel
Strand 5
J
136 142anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
156 157first strand
Strand 2
J
146 151anti-parallel
Strand 3
J
169 176anti-parallel
Strand 4
J
180 187anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
76 80first strand
Strand 2
K
83 91anti-parallel
Strand 3
K
277 286anti-parallel
Strand 4
K
289 301anti-parallel
Strand 5
K
304 312anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
96 97first strand
Strand 2
K
196 197parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
206 207first strand
Strand 2
K
271 272parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il