Analysis of interatomic Contacts of Structural Units in PDB entry:
3CIG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CIG entry

There is 1 chain in PDB entry 3CIG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 27LYS 697
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3CIG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
92 98Right-handed alpha
Helix 2
2
A
188 195Right-handed 310
Helix 3
3
A
234 246Right-handed alpha
Helix 4
4
A
268 272Right-handed 310
Helix 5
5
A
401 405Right-handed 310
Helix 6
6
A
626 635Right-handed alpha
Helix 7
7
A
650 664Right-handed alpha
Helix 8
8
A
670 675Right-handed alpha
Helix 9
9
A
680 684Right-handed 310
Helix 10
10
A
687 691Right-handed 310
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There are 8 sheets in PDB entry 3CIG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 25 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
79 81parallel
Strand 3
A
103 105parallel
Strand 4
A
127 129parallel
Strand 5
A
151 153parallel
Strand 6
A
175 177parallel
Strand 7
A
201 203parallel
Strand 8
A
225 227parallel
Strand 9
A
252 254parallel
Strand 10
A
278 280parallel
Strand 11
A
302 304parallel
Strand 12
A
326 328parallel
Strand 13
A
359 361parallel
Strand 14
A
383 385parallel
Strand 15
A
411 413parallel
Strand 16
A
435 437parallel
Strand 17
A
460 462parallel
Strand 18
A
484 486parallel
Strand 19
A
510 512parallel
Strand 20
A
534 536parallel
Strand 21
A
566 568parallel
Strand 22
A
590 592parallel
Strand 23
A
614 616parallel
Strand 24
A
639 641parallel
Strand 25
A
667 668parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
211 212parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
222 223parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
288 289parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
345 346parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
421 422parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 446first strand
Strand 2
A
468 470parallel
Strand 3
A
492 493parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
677 679parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il