Analysis of interatomic Contacts of Structural Units in PDB entry:
3CIS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CIS entry

There are 8 chains in PDB entry 3CIS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6GLU 294
B
 ASN 5GLU 294
C
 SER 6SER 295
D
 SER 6GLU 294
E
 ASN 5SER 295
F
 SER 7GLU 294
G
 GLY 4SER 295
H
 SER 6GLU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 85 helices in PDB entry 3CIS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 35Right-handed alpha
Helix 2
2
A
57 83Right-handed alpha
Helix 3
3
A
99 108Right-handed alpha
Helix 4
4
A
130 140Right-handed alpha
Helix 5
5
A
169 186Right-handed alpha
Helix 6
6
A
208 225Right-handed alpha
Helix 7
7
A
226 231Right-handed alpha
Helix 8
8
A
244 254Right-handed alpha
Helix 9
9
A
275 285Right-handed alpha
Helix 10
10
B
17 35Right-handed alpha
Helix 11
11
B
57 59Right-handed 310
Helix 12
12
B
60 83Right-handed alpha
Helix 13
13
B
99 108Right-handed alpha
Helix 14
14
B
109 111Right-handed 310
Helix 15
15
B
130 140Right-handed alpha
Helix 16
16
B
169 187Right-handed alpha
Helix 17
17
B
208 224Right-handed alpha
Helix 18
18
B
224 231Right-handed alpha
Helix 19
19
B
244 253Right-handed alpha
Helix 20
20
B
254 256Right-handed 310
Helix 21
21
B
275 285Right-handed alpha
Helix 22
22
C
17 35Right-handed alpha
Helix 23
23
C
57 82Right-handed alpha
Helix 24
24
C
99 108Right-handed alpha
Helix 25
25
C
130 140Right-handed alpha
Helix 26
26
C
169 186Right-handed alpha
Helix 27
27
C
208 225Right-handed alpha
Helix 28
28
C
226 231Right-handed alpha
Helix 29
29
C
244 253Right-handed alpha
Helix 30
30
C
254 256Right-handed 310
Helix 31
31
C
275 285Right-handed alpha
Helix 32
32
D
17 35Right-handed alpha
Helix 33
33
D
57 59Right-handed 310
Helix 34
34
D
60 83Right-handed alpha
Helix 35
35
D
99 108Right-handed alpha
Helix 36
36
D
109 111Right-handed 310
Helix 37
37
D
130 140Right-handed alpha
Helix 38
38
D
169 187Right-handed alpha
Helix 39
39
D
208 224Right-handed alpha
Helix 40
40
D
224 231Right-handed alpha
Helix 41
41
D
244 253Right-handed alpha
Helix 42
42
D
254 256Right-handed 310
Helix 43
43
D
275 285Right-handed alpha
Helix 44
44
E
17 35Right-handed alpha
Helix 45
45
E
57 83Right-handed alpha
Helix 46
46
E
99 108Right-handed alpha
Helix 47
47
E
130 140Right-handed alpha
Helix 48
48
E
169 186Right-handed alpha
Helix 49
49
E
208 225Right-handed alpha
Helix 50
50
E
226 231Right-handed alpha
Helix 51
51
E
244 253Right-handed alpha
Helix 52
52
E
254 256Right-handed 310
Helix 53
53
E
275 285Right-handed alpha
Helix 54
54
F
17 35Right-handed alpha
Helix 55
55
F
57 83Right-handed alpha
Helix 56
56
F
99 108Right-handed alpha
Helix 57
57
F
109 111Right-handed 310
Helix 58
58
F
130 140Right-handed alpha
Helix 59
59
F
169 187Right-handed alpha
Helix 60
60
F
208 224Right-handed alpha
Helix 61
61
F
224 231Right-handed alpha
Helix 62
62
F
244 253Right-handed alpha
Helix 63
63
F
254 256Right-handed 310
Helix 64
64
F
275 285Right-handed alpha
Helix 65
65
G
17 35Right-handed alpha
Helix 66
66
G
57 83Right-handed alpha
Helix 67
67
G
99 108Right-handed alpha
Helix 68
68
G
130 140Right-handed alpha
Helix 69
69
G
169 186Right-handed alpha
Helix 70
70
G
208 225Right-handed alpha
Helix 71
71
G
226 231Right-handed alpha
Helix 72
72
G
244 253Right-handed alpha
Helix 73
73
G
254 256Right-handed 310
Helix 74
74
G
275 285Right-handed alpha
Helix 75
75
H
17 35Right-handed alpha
Helix 76
76
H
57 83Right-handed alpha
Helix 77
77
H
99 108Right-handed alpha
Helix 78
78
H
109 111Right-handed 310
Helix 79
79
H
130 140Right-handed alpha
Helix 80
80
H
169 187Right-handed alpha
Helix 81
81
H
208 224Right-handed alpha
Helix 82
82
H
224 231Right-handed alpha
Helix 83
83
H
244 253Right-handed alpha
Helix 84
84
H
254 256Right-handed 310
Helix 85
85
H
275 285Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3CIS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 96first strand
Strand 2
A
38 43parallel
Strand 3
A
9 13parallel
Strand 4
A
111 117parallel
Strand 5
A
144 147parallel
Strand 6
A
289 292anti-parallel
Strand 7
A
258 262parallel
Strand 8
A
162 165parallel
Strand 9
A
190 195parallel
Strand 10
A
236 241parallel
Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 96first strand
Strand 2
B
38 43parallel
Strand 3
B
10 13parallel
Strand 4
B
113 117parallel
Strand 5
B
144 147parallel
Strand 6
B
289 292anti-parallel
Strand 7
B
258 262parallel
Strand 8
B
162 165parallel
Strand 9
B
190 195parallel
Strand 10
B
236 241parallel
Back to list of sheets
Back to top of page

There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
91 96first strand
Strand 2
C
38 43parallel
Strand 3
C
9 13parallel
Strand 4
C
111 117parallel
Strand 5
C
144 147parallel
Strand 6
C
289 292anti-parallel
Strand 7
C
258 262parallel
Strand 8
C
162 165parallel
Strand 9
C
190 195parallel
Strand 10
C
236 241parallel
Back to list of sheets
Back to top of page

There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 96first strand
Strand 2
D
38 43parallel
Strand 3
D
10 13parallel
Strand 4
D
113 117parallel
Strand 5
D
144 147parallel
Strand 6
D
289 292anti-parallel
Strand 7
D
258 262parallel
Strand 8
D
162 165parallel
Strand 9
D
190 195parallel
Strand 10
D
236 241parallel
Back to list of sheets
Back to top of page

There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
91 96first strand
Strand 2
E
38 43parallel
Strand 3
E
9 13parallel
Strand 4
E
111 117parallel
Strand 5
E
144 147parallel
Strand 6
E
289 292anti-parallel
Strand 7
E
258 262parallel
Strand 8
E
162 165parallel
Strand 9
E
190 195parallel
Strand 10
E
236 241parallel
Back to list of sheets
Back to top of page

There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
92 96first strand
Strand 2
F
38 43parallel
Strand 3
F
10 13parallel
Strand 4
F
113 117parallel
Strand 5
F
144 147parallel
Strand 6
F
289 292anti-parallel
Strand 7
F
258 262parallel
Strand 8
F
162 165parallel
Strand 9
F
190 195parallel
Strand 10
F
236 241parallel
Back to list of sheets
Back to top of page

There are 10 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
91 96first strand
Strand 2
G
38 43parallel
Strand 3
G
9 13parallel
Strand 4
G
111 117parallel
Strand 5
G
144 147parallel
Strand 6
G
289 292anti-parallel
Strand 7
G
258 262parallel
Strand 8
G
162 165parallel
Strand 9
G
190 195parallel
Strand 10
G
236 241parallel
Back to list of sheets
Back to top of page

There are 10 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
92 96first strand
Strand 2
H
38 43parallel
Strand 3
H
10 13parallel
Strand 4
H
113 117parallel
Strand 5
H
144 147parallel
Strand 6
H
289 292anti-parallel
Strand 7
H
258 262parallel
Strand 8
H
162 165parallel
Strand 9
H
190 195parallel
Strand 10
H
236 241parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il