Analysis of interatomic Contacts of Structural Units in PDB entry:
3CKD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CKD entry

There are 3 chains in PDB entry 3CKD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 284ARG 565
B
 LEU 285ARG 565
C
 HIS 283ARG 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3CKD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
284 291Right-handed alpha
Helix 2
2
A
305 309Right-handed 310
Helix 3
3
A
313 326Right-handed alpha
Helix 4
4
A
335 350Right-handed alpha
Helix 5
5
A
350 364Right-handed alpha
Helix 6
6
A
371 391Right-handed alpha
Helix 7
7
A
396 422Right-handed alpha
Helix 8
8
A
428 440Right-handed alpha
Helix 9
9
A
462 486Right-handed alpha
Helix 10
10
A
488 498Right-handed alpha
Helix 11
11
A
499 527Right-handed alpha
Helix 12
12
A
534 565Right-handed alpha
Helix 13
13
B
285 291Right-handed alpha
Helix 14
14
B
301 302Right-handed 310
Helix 15
15
B
304 306Right-handed 310
Helix 16
16
B
313 325Right-handed alpha
Helix 17
17
B
338 350Right-handed alpha
Helix 18
18
B
350 362Right-handed alpha
Helix 19
19
B
373 391Right-handed alpha
Helix 20
20
B
396 421Right-handed alpha
Helix 21
21
B
429 445Right-handed alpha
Helix 22
22
B
462 486Right-handed alpha
Helix 23
23
B
488 499Right-handed alpha
Helix 24
24
B
499 530Right-handed alpha
Helix 25
25
B
534 564Right-handed alpha
Helix 26
26
C
284 291Right-handed alpha
Helix 27
27
C
292 293Right-handed 310
Helix 28
28
C
294 296Right-handed 310
Helix 29
29
C
297 307Right-handed alpha
Helix 30
30
C
313 326Right-handed alpha
Helix 31
31
C
333 350Right-handed alpha
Helix 32
32
C
350 364Right-handed alpha
Helix 33
33
C
371 391Right-handed alpha
Helix 34
34
C
396 424Right-handed alpha
Helix 35
35
C
428 440Right-handed alpha
Helix 36
36
C
440 445Right-handed alpha
Helix 37
37
C
462 487Right-handed alpha
Helix 38
38
C
488 499Right-handed alpha
Helix 39
39
C
499 530Right-handed alpha
Helix 40
40
C
534 563Right-handed alpha
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There are no sheets in PDB entry 3CKD
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