Analysis of interatomic Contacts of Structural Units in PDB entry:
3CML


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CML entry

There is 1 chain in PDB entry 3CML (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1228SER 1575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3CML. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1266 1271Right-handed alpha
Helix 2
2
A
1292 1317Right-handed alpha
Helix 3
3
A
1320 1325Right-handed alpha
Helix 4
4
A
1342 1360Right-handed alpha
Helix 5
5
A
1371 1384Right-handed alpha
Helix 6
6
A
1397 1423Right-handed alpha
Helix 7
7
A
1443 1447Right-handed 310
Helix 8
8
A
1448 1477Right-handed alpha
Helix 9
9
A
1498 1530Right-handed alpha
Helix 10
10
A
1534 1543Right-handed alpha
Helix 11
11
A
1544 1547Right-handed 310
Helix 12
12
A
1550 1555Right-handed alpha
Helix 13
13
A
1558 1565Right-handed alpha
Helix 14
14
A
1567 1571Right-handed 310
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There is 1 sheet ( A) in PDB entry 3CML.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1250 1251first strand
Strand 2
A
1264 1265anti-parallel
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