Analysis of interatomic Contacts of Structural Units in PDB entry:
3CPZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CPZ entry

There is 1 chain in PDB entry 3CPZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1227SER 1575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3CPZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1266 1271Right-handed alpha
Helix 2
2
A
1292 1317Right-handed alpha
Helix 3
3
A
1342 1359Right-handed alpha
Helix 4
4
A
1371 1378Right-handed alpha
Helix 5
5
A
1399 1407Right-handed alpha
Helix 6
6
A
1408 1418Right-handed alpha
Helix 7
7
A
1443 1447Right-handed 310
Helix 8
8
A
1448 1473Right-handed alpha
Helix 9
9
A
1474 1476Right-handed 310
Helix 10
10
A
1499 1530Right-handed alpha
Helix 11
11
A
1534 1543Right-handed alpha
Helix 12
12
A
1543 1548Right-handed alpha
Helix 13
13
A
1550 1555Right-handed alpha
Helix 14
14
A
1560 1565Right-handed alpha
Helix 15
15
A
1567 1571Right-handed 310
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There is 1 sheet ( A) in PDB entry 3CPZ.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1250 1251first strand
Strand 2
A
1264 1265anti-parallel
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