Analysis of interatomic Contacts of Structural Units in PDB entry:
3CSM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CSM entry

There are 2 chains in PDB entry 3CSM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 256
B
 MET 1GLU 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3CSM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 9Right-handed alpha
Helix 2
2
A
12 35Right-handed alpha
Helix 3
3
A
40 43Right-handed alpha
Helix 4
4
A
48 50Right-handed 310
Helix 5
5
A
59 74Right-handed alpha
Helix 6
6
A
76 78Right-handed 310
Helix 7
7
A
87 89Right-handed 310
Helix 8
8
A
108 110Right-handed 310
Helix 9
9
A
114 123Right-handed alpha
Helix 10
10
A
125 129Right-handed alpha
Helix 11
11
A
140 181Right-handed alpha
Helix 12
12
A
185 192Right-handed alpha
Helix 13
13
A
195 212Right-handed alpha
Helix 14
14
A
227 236Right-handed alpha
Helix 15
15
A
238 253Right-handed alpha
Helix 16
16
B
6 9Right-handed alpha
Helix 17
17
B
12 35Right-handed alpha
Helix 18
18
B
40 43Right-handed alpha
Helix 19
19
B
48 50Right-handed 310
Helix 20
20
B
59 74Right-handed alpha
Helix 21
21
B
76 78Right-handed 310
Helix 22
22
B
87 89Right-handed 310
Helix 23
23
B
108 110Right-handed 310
Helix 24
24
B
114 123Right-handed alpha
Helix 25
25
B
125 129Right-handed alpha
Helix 26
26
B
140 181Right-handed alpha
Helix 27
27
B
185 192Right-handed alpha
Helix 28
28
B
195 212Right-handed alpha
Helix 29
29
B
227 236Right-handed alpha
Helix 30
30
B
238 253Right-handed alpha
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There are no sheets in PDB entry 3CSM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il