Analysis of interatomic Contacts of Structural Units in PDB entry:
3CSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CSV entry

There is 1 chain in PDB entry 3CSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ALA 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3CSV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 15Right-handed alpha
Helix 2
2
A
58 71Right-handed alpha
Helix 3
3
A
97 105Right-handed alpha
Helix 4
4
A
108 125Right-handed alpha
Helix 5
5
A
135 142Right-handed alpha
Helix 6
6
A
144 149Right-handed alpha
Helix 7
7
A
149 156Right-handed alpha
Helix 8
8
A
159 178Right-handed alpha
Helix 9
9
A
190 192Right-handed 310
Helix 10
10
A
201 204Right-handed 310
Helix 11
11
A
220 228Right-handed alpha
Helix 12
12
A
235 251Right-handed alpha
Helix 13
13
A
253 282Right-handed alpha
Helix 14
14
A
285 290Right-handed 310
Helix 15
15
A
291 304Right-handed alpha
Helix 16
16
A
305 307Right-handed 310
Helix 17
17
A
308 319Right-handed alpha
Helix 18
18
A
323 332Right-handed alpha
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There are 3 sheets in PDB entry 3CSV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
35 38anti-parallel
Strand 3
A
44 49anti-parallel
Strand 4
A
87 90anti-parallel
Strand 5
A
78 82anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 185first strand
Strand 2
A
215 217anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
206 208anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il