Analysis of interatomic Contacts of Structural Units in PDB entry:
3CU7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3CU7 entry

There is 1 chain in PDB entry 3CU7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 20	LEU 1303

There are 58 helices in PDB entry 3CU7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	443	447	Right-handed 310
Helix 2	2	A	531	535	Right-handed 310
Helix 3	3	A	619	627	Right-handed alpha
Helix 4	4	A	642	649	Right-handed alpha
Helix 5	5	A	680	685	Right-handed alpha
Helix 6	6	A	686	689	Right-handed 310
Helix 7	7	A	692	701	Right-handed alpha
Helix 8	8	A	702	704	Right-handed 310
Helix 9	9	A	710	717	Right-handed alpha
Helix 10	10	A	724	740	Right-handed alpha
Helix 11	11	A	984	993	Right-handed alpha
Helix 12	12	A	1008	1013	Right-handed alpha
Helix 13	13	A	1015	1028	Right-handed alpha
Helix 14	14	A	1030	1034	Right-handed 310
Helix 15	15	A	1037	1056	Right-handed alpha
Helix 16	16	A	1057	1060	Right-handed 310
Helix 17	17	A	1075	1091	Right-handed alpha
Helix 18	18	A	1096	1111	Right-handed alpha
Helix 19	19	A	1132	1155	Right-handed alpha
Helix 20	20	A	1156	1159	Right-handed 310
Helix 21	21	A	1161	1180	Right-handed alpha
Helix 22	22	A	1184	1196	Right-handed alpha
Helix 23	23	A	1202	1216	Right-handed alpha
Helix 24	24	A	1244	1261	Right-handed alpha
Helix 25	25	A	1263	1278	Right-handed alpha
Helix 26	26	A	1289	1304	Right-handed alpha
Helix 27	27	A	1435	1444	Right-handed alpha
Helix 28	28	A	1524	1529	Right-handed alpha
Helix 29	29	A	1549	1554	Right-handed alpha
Helix 30	30	A	1658	1663	Right-handed alpha
Helix 31	31	A	1665	1672	Right-handed alpha
Helix 32	32	B	443	447	Right-handed 310
Helix 33	33	B	531	535	Right-handed 310
Helix 34	34	B	619	627	Right-handed alpha
Helix 35	35	B	642	649	Right-handed alpha
Helix 36	36	B	680	685	Right-handed alpha
Helix 37	37	B	686	689	Right-handed 310
Helix 38	38	B	692	701	Right-handed alpha
Helix 39	39	B	702	704	Right-handed 310
Helix 40	40	B	710	717	Right-handed alpha
Helix 41	41	B	724	740	Right-handed alpha
Helix 42	42	B	984	993	Right-handed alpha
Helix 43	43	B	1008	1013	Right-handed alpha
Helix 44	44	B	1015	1028	Right-handed alpha
Helix 45	45	B	1030	1034	Right-handed 310
Helix 46	46	B	1037	1056	Right-handed alpha
Helix 47	47	B	1057	1060	Right-handed 310
Helix 48	48	B	1075	1091	Right-handed alpha
Helix 49	49	B	1096	1111	Right-handed alpha
Helix 50	50	B	1132	1155	Right-handed alpha
Helix 51	51	B	1156	1159	Right-handed 310
Helix 52	52	B	1161	1180	Right-handed alpha
Helix 53	53	B	1184	1196	Right-handed alpha
Helix 54	54	B	1202	1216	Right-handed alpha
Helix 55	55	B	1244	1261	Right-handed alpha
Helix 56	56	B	1263	1278	Right-handed alpha
Helix 57	57	B	1289	1304	Right-handed alpha
Helix 58	58	B	1435	1444	Right-handed alpha

There are 61 sheets in PDB entry 3CU7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH, BI,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	81	first strand
Strand 2	A	41	43	anti-parallel
Strand 3	A	23	28	anti-parallel
Strand 4	A	651	654	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	32	first strand
Strand 2	A	119	120	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	38	first strand
Strand 2	A	84	85	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	65	first strand
Strand 2	A	52	58	anti-parallel
Strand 3	A	102	108	anti-parallel
Strand 4	A	112	117	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	130	first strand
Strand 2	A	143	148	anti-parallel
Strand 3	A	182	184	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	212	219	parallel
Strand 3	A	197	204	anti-parallel
Strand 4	A	159	164	anti-parallel
Strand 5	A	174	176	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	141	first strand
Strand 2	A	188	189	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	222	first strand
Strand 2	A	764	765	parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	229	first strand
Strand 2	A	252	254	anti-parallel
Strand 3	A	258	259	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	233	first strand
Strand 2	A	247	250	anti-parallel
Strand 3	A	297	300	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	238	first strand
Strand 2	A	346	347	parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	281	283	first strand
Strand 2	A	262	272	anti-parallel
Strand 3	A	292	293	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	281	283	first strand
Strand 2	A	262	272	anti-parallel
Strand 3	A	322	331	anti-parallel
Strand 4	A	338	342	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	354	first strand
Strand 2	A	369	377	anti-parallel
Strand 3	A	417	422	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	363	first strand
Strand 2	A	449	456	parallel
Strand 3	A	428	437	anti-parallel
Strand 4	A	387	396	anti-parallel
Strand 5	A	401	403	anti-parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	363	first strand
Strand 2	A	449	456	parallel
Strand 3	A	428	437	anti-parallel
Strand 4	A	387	396	anti-parallel
Strand 5	A	407	410	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	469	first strand
Strand 2	A	481	487	anti-parallel
Strand 3	A	524	529	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	516	first strand
Strand 2	A	498	505	anti-parallel
Strand 3	A	537	546	anti-parallel
Strand 4	A	553	562	anti-parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	575	first strand
Strand 2	A	587	593	anti-parallel
Strand 3	A	783	789	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	777	780	first strand
Strand 2	A	598	602	anti-parallel
Strand 3	A	801	805	anti-parallel
Strand 4	A	808	811	anti-parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	605	606	first strand
Strand 2	A	795	799	anti-parallel
Strand 3	A	815	819	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	823	828	first strand
Strand 2	A	839	847	anti-parallel
Strand 3	A	898	902	anti-parallel
Strand 4	A	865	866	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	823	828	first strand
Strand 2	A	839	847	anti-parallel
Strand 3	A	892	895	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	833	834	first strand
Strand 2	A	929	930	parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	858	859	first strand
Strand 2	A	910	916	anti-parallel
Strand 3	A	919	925	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	934	944	first strand
Strand 2	A	1357	1366	anti-parallel
Strand 3	A	974	980	anti-parallel
Strand 4	A	1338	1339	anti-parallel

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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	957	959	first strand
Strand 2	A	1346	1348	anti-parallel
Strand 3	A	1315	1317	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1217	1219	first strand
Strand 2	A	1225	1227	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1377	1384	first strand
Strand 2	A	1401	1408	anti-parallel
Strand 3	A	1473	1480	anti-parallel
Strand 4	A	1433	1434	anti-parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1455	1456	first strand
Strand 2	A	1459	1464	anti-parallel
Strand 3	A	1422	1427	anti-parallel
Strand 4	A	1491	1497	anti-parallel
Strand 5	A	1500	1509	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1598	1601	first strand
Strand 2	A	1576	1586	anti-parallel
Strand 3	A	1559	1567	anti-parallel
Strand 4	A	1618	1621	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	B	41	43	anti-parallel
Strand 3	B	23	28	anti-parallel
Strand 4	B	651	654	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	32	first strand
Strand 2	B	119	120	parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	38	first strand
Strand 2	B	84	85	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	65	first strand
Strand 2	B	52	58	anti-parallel
Strand 3	B	102	108	anti-parallel
Strand 4	B	112	117	anti-parallel

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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	130	first strand
Strand 2	B	143	148	anti-parallel
Strand 3	B	182	184	anti-parallel

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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	135	first strand
Strand 2	B	212	219	parallel
Strand 3	B	197	204	anti-parallel
Strand 4	B	159	164	anti-parallel
Strand 5	B	174	176	anti-parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	141	first strand
Strand 2	B	188	189	anti-parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	222	first strand
Strand 2	B	764	765	parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	228	229	first strand
Strand 2	B	252	254	anti-parallel
Strand 3	B	258	259	anti-parallel

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There are 3 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	233	first strand
Strand 2	B	247	250	anti-parallel
Strand 3	B	297	300	anti-parallel

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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	238	first strand
Strand 2	B	346	347	parallel

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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	281	283	first strand
Strand 2	B	262	272	anti-parallel
Strand 3	B	292	293	anti-parallel

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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	281	283	first strand
Strand 2	B	262	272	anti-parallel
Strand 3	B	322	331	anti-parallel
Strand 4	B	338	342	anti-parallel

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There are 3 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	354	first strand
Strand 2	B	369	377	anti-parallel
Strand 3	B	417	422	anti-parallel

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There are 5 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	363	first strand
Strand 2	B	449	456	parallel
Strand 3	B	428	437	anti-parallel
Strand 4	B	387	396	anti-parallel
Strand 5	B	401	403	anti-parallel

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There are 5 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	363	first strand
Strand 2	B	449	456	parallel
Strand 3	B	428	437	anti-parallel
Strand 4	B	387	396	anti-parallel
Strand 5	B	407	410	anti-parallel

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There are 3 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	466	469	first strand
Strand 2	B	481	487	anti-parallel
Strand 3	B	524	529	anti-parallel

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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	508	516	first strand
Strand 2	B	498	505	anti-parallel
Strand 3	B	537	546	anti-parallel
Strand 4	B	553	562	anti-parallel

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There are 3 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	574	575	first strand
Strand 2	B	587	593	anti-parallel
Strand 3	B	783	789	anti-parallel

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There are 4 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	777	780	first strand
Strand 2	B	598	602	anti-parallel
Strand 3	B	801	805	anti-parallel
Strand 4	B	808	811	anti-parallel

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There are 3 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	605	606	first strand
Strand 2	B	795	799	anti-parallel
Strand 3	B	815	819	anti-parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	823	828	first strand
Strand 2	B	839	847	anti-parallel
Strand 3	B	898	902	anti-parallel
Strand 4	B	865	866	anti-parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	823	828	first strand
Strand 2	B	839	847	anti-parallel
Strand 3	B	892	895	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	833	834	first strand
Strand 2	B	929	930	parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	858	859	first strand
Strand 2	B	910	916	anti-parallel
Strand 3	B	919	925	anti-parallel

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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	934	944	first strand
Strand 2	B	1357	1366	anti-parallel
Strand 3	B	974	980	anti-parallel
Strand 4	B	1338	1339	anti-parallel

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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	957	959	first strand
Strand 2	B	1346	1348	anti-parallel
Strand 3	B	1315	1317	anti-parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1217	1219	first strand
Strand 2	B	1225	1227	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1377	1384	first strand
Strand 2	B	1401	1408	anti-parallel
Strand 3	B	1473	1480	anti-parallel
Strand 4	B	1433	1434	anti-parallel

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There are 5 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1455	1456	first strand
Strand 2	B	1459	1464	anti-parallel
Strand 3	B	1422	1427	anti-parallel
Strand 4	B	1491	1497	anti-parallel
Strand 5	B	1500	1509	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3CU7

Analysis of interatomic Contacts of Structural Units in PDB entry:
3CU7