Analysis of interatomic Contacts of Structural Units in PDB entry:
3CV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CV2 entry

There are 4 chains in PDB entry 3CV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 10GLY 437
A
 VAL 439ALA 533
B
 ASP 9GLY 437
B
 VAL 439ALA 533
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 47 helices in PDB entry 3CV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 25Right-handed alpha
Helix 2
2
A
26 60Right-handed alpha
Helix 3
3
A
70 75Right-handed alpha
Helix 4
4
A
84 88Right-handed 310
Helix 5
5
A
99 108Right-handed alpha
Helix 6
6
A
125 141Right-handed alpha
Helix 7
7
A
186 205Right-handed alpha
Helix 8
8
A
218 236Right-handed alpha
Helix 9
9
A
251 256Right-handed alpha
Helix 10
10
A
257 265Right-handed alpha
Helix 11
11
A
275 287Right-handed alpha
Helix 12
12
A
290 294Right-handed 310
Helix 13
13
A
297 301Right-handed 310
Helix 14
14
A
305 322Right-handed alpha
Helix 15
15
A
338 360Right-handed alpha
Helix 16
16
A
368 370Right-handed 310
Helix 17
17
A
371 384Right-handed alpha
Helix 18
18
A
401 407Right-handed alpha
Helix 19
19
A
414 434Right-handed alpha
Helix 20
20
A
447 464Right-handed alpha
Helix 21
21
A
475 495Right-handed alpha
Helix 22
22
A
495 502Right-handed alpha
Helix 23
23
A
503 517Right-handed alpha
Helix 24
24
A
524 530Right-handed alpha
Helix 25
25
B
18 25Right-handed alpha
Helix 26
26
B
26 60Right-handed alpha
Helix 27
27
B
70 76Right-handed alpha
Helix 28
28
B
84 88Right-handed 310
Helix 29
29
B
99 108Right-handed alpha
Helix 30
30
B
125 141Right-handed alpha
Helix 31
31
B
186 205Right-handed alpha
Helix 32
32
B
218 236Right-handed alpha
Helix 33
33
B
251 256Right-handed alpha
Helix 34
34
B
257 265Right-handed alpha
Helix 35
35
B
275 287Right-handed alpha
Helix 36
36
B
290 294Right-handed 310
Helix 37
37
B
297 301Right-handed 310
Helix 38
38
B
305 322Right-handed alpha
Helix 39
39
B
338 360Right-handed alpha
Helix 40
40
B
368 370Right-handed 310
Helix 41
41
B
371 384Right-handed alpha
Helix 42
42
B
401 407Right-handed alpha
Helix 43
43
B
414 434Right-handed alpha
Helix 44
44
B
447 464Right-handed alpha
Helix 45
45
B
475 502Right-handed alpha
Helix 46
46
B
503 517Right-handed alpha
Helix 47
47
B
524 530Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3CV2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
173 179anti-parallel
Strand 3
A
182 185anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
269 274parallel
Strand 3
A
244 249parallel
Strand 4
A
210 213parallel
Strand 5
A
162 166parallel
Strand 6
A
113 117parallel
Strand 7
A
92 97parallel
Strand 8
A
364 366parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 441first strand
Strand 2
A
444 446anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
173 179anti-parallel
Strand 3
B
182 185anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 327first strand
Strand 2
B
269 274parallel
Strand 3
B
244 249parallel
Strand 4
B
210 213parallel
Strand 5
B
162 166parallel
Strand 6
B
113 117parallel
Strand 7
B
92 97parallel
Strand 8
B
364 366parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
153 155anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 441first strand
Strand 2
B
444 446anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il