Analysis of interatomic Contacts of Structural Units in PDB entry:
3CV7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CV7 entry

There is 1 chain in PDB entry 3CV7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3CV7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
47 51Right-handed 310
Helix 3
3
A
52 64Right-handed alpha
Helix 4
4
A
71 75Right-handed 310
Helix 5
5
A
82 86Right-handed 310
Helix 6
6
A
87 103Right-handed alpha
Helix 7
7
A
139 153Right-handed alpha
Helix 8
8
A
165 174Right-handed alpha
Helix 9
9
A
193 204Right-handed alpha
Helix 10
10
A
227 230Right-handed 310
Helix 11
11
A
231 242Right-handed alpha
Helix 12
12
A
244 256Right-handed alpha
Helix 13
13
A
266 275Right-handed alpha
Helix 14
14
A
282 291Right-handed alpha
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There are 3 sheets in PDB entry 3CV7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
13 15anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
76 81parallel
Strand 3
A
107 112parallel
Strand 4
A
156 162parallel
Strand 5
A
182 186parallel
Strand 6
A
206 210parallel
Strand 7
A
259 260parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
135 136anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il