Analysis of interatomic Contacts of Structural Units in PDB entry:
3CVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CVP entry

There are 2 chains in PDB entry 3CVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 336PHE 648
B
 ASN 5LEU 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3CVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
344 349Right-handed 310
Helix 2
2
A
351 362Right-handed alpha
Helix 3
3
A
364 379Right-handed alpha
Helix 4
4
A
382 396Right-handed alpha
Helix 5
5
A
398 413Right-handed alpha
Helix 6
6
A
416 430Right-handed alpha
Helix 7
7
A
432 446Right-handed alpha
Helix 8
8
A
478 496Right-handed alpha
Helix 9
9
A
499 513Right-handed alpha
Helix 10
10
A
515 530Right-handed alpha
Helix 11
11
A
533 547Right-handed alpha
Helix 12
12
A
549 564Right-handed alpha
Helix 13
13
A
567 581Right-handed alpha
Helix 14
14
A
583 599Right-handed alpha
Helix 15
16
A
629 636Right-handed alpha
Helix 16
17
A
637 639Right-handed 310
Helix 17
18
A
641 648Right-handed alpha
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There are no sheets in PDB entry 3CVP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il