Analysis of interatomic Contacts of Structural Units in PDB entry:
3CVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CVR entry

There is 1 chain in PDB entry 3CVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 25LEU 561
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3CVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 38Right-handed alpha
Helix 2
2
A
45 59Right-handed alpha
Helix 3
3
A
223 229Right-handed 310
Helix 4
4
A
243 256Right-handed alpha
Helix 5
5
A
281 286Right-handed alpha
Helix 6
6
A
295 302Right-handed alpha
Helix 7
7
A
308 322Right-handed alpha
Helix 8
8
A
330 345Right-handed alpha
Helix 9
9
A
345 359Right-handed alpha
Helix 10
10
A
366 384Right-handed alpha
Helix 11
11
A
391 417Right-handed alpha
Helix 12
12
A
423 436Right-handed alpha
Helix 13
13
A
457 482Right-handed alpha
Helix 14
14
A
483 493Right-handed alpha
Helix 15
15
A
494 505Right-handed alpha
Helix 16
16
A
542 560Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3CVR.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
84 86parallel
Strand 3
A
104 106parallel
Strand 4
A
124 126parallel
Strand 5
A
144 146parallel
Strand 6
A
164 166parallel
Strand 7
A
184 186parallel
Strand 8
A
210 213parallel
Strand 9
A
233 236parallel
Strand 10
A
263 265parallel
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