Analysis of interatomic Contacts of Structural Units in PDB entry:
3CWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CWV entry

There are 2 chains in PDB entry 3CWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8ARG 356
B
 ILE 10THR 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3CWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 17Right-handed alpha
Helix 2
2
A
18 23Right-handed alpha
Helix 3
3
A
26 47Right-handed alpha
Helix 4
4
A
73 82Right-handed alpha
Helix 5
5
A
85 89Right-handed 310
Helix 6
6
A
100 107Right-handed alpha
Helix 7
7
A
169 184Right-handed alpha
Helix 8
8
A
206 217Right-handed alpha
Helix 9
9
A
265 284Right-handed alpha
Helix 10
10
A
286 290Right-handed 310
Helix 11
11
A
291 296Right-handed alpha
Helix 12
12
A
308 312Right-handed 310
Helix 13
13
A
326 344Right-handed alpha
Helix 14
14
A
348 354Right-handed alpha
Helix 15
15
B
10 17Right-handed alpha
Helix 16
16
B
17 23Right-handed alpha
Helix 17
17
B
26 47Right-handed alpha
Helix 18
18
B
100 107Right-handed alpha
Helix 19
19
B
169 184Right-handed alpha
Helix 20
20
B
206 217Right-handed alpha
Helix 21
21
B
265 284Right-handed alpha
Helix 22
22
B
286 290Right-handed 310
Helix 23
23
B
291 296Right-handed alpha
Helix 24
24
B
308 312Right-handed 310
Helix 25
25
B
326 344Right-handed alpha
Helix 26
26
B
348 354Right-handed alpha
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There are 4 sheets in PDB entry 3CWV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
120 127anti-parallel
Strand 3
A
136 138anti-parallel
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There are 16 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
120 127anti-parallel
Strand 3
A
108 117anti-parallel
Strand 4
A
150 158anti-parallel
Strand 5
A
63 69anti-parallel
Strand 6
A
52 57anti-parallel
Strand 7
A
188 193parallel
Strand 8
A
198 203anti-parallel
Strand 9
B
198 203anti-parallel
Strand 10
B
188 193anti-parallel
Strand 11
B
52 57parallel
Strand 12
B
63 68anti-parallel
Strand 13
B
151 158anti-parallel
Strand 14
B
108 116anti-parallel
Strand 15
B
122 127anti-parallel
Strand 16
B
130 131anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 233first strand
Strand 2
A
236 244anti-parallel
Strand 3
A
299 306anti-parallel
Strand 4
A
251 256parallel
Strand 5
A
259 260anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 233first strand
Strand 2
B
236 244anti-parallel
Strand 3
B
299 306anti-parallel
Strand 4
B
251 256parallel
Strand 5
B
259 260anti-parallel
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