Analysis of interatomic Contacts of Structural Units in PDB entry:
3D1B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3D1B entry

There are 3 chains in PDB entry 3D1B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 434GLU 544
B
 ASP 437GLU 544
C
 ASP 437GLU 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3D1B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
434 445Right-handed alpha
Helix 2
2
A
446 451Right-handed alpha
Helix 3
3
A
452 468Right-handed alpha
Helix 4
4
A
472 482Right-handed alpha
Helix 5
5
A
494 506Right-handed alpha
Helix 6
6
A
509 527Right-handed alpha
Helix 7
7
A
529 544Right-handed alpha
Helix 8
8
B
437 446Right-handed alpha
Helix 9
9
B
446 451Right-handed alpha
Helix 10
10
B
452 468Right-handed alpha
Helix 11
11
B
472 482Right-handed alpha
Helix 12
12
B
494 506Right-handed alpha
Helix 13
13
B
509 527Right-handed alpha
Helix 14
14
B
529 544Right-handed alpha
Helix 15
15
C
437 446Right-handed alpha
Helix 16
16
C
446 451Right-handed alpha
Helix 17
17
C
452 468Right-handed alpha
Helix 18
18
C
472 483Right-handed alpha
Helix 19
19
C
494 507Right-handed alpha
Helix 20
20
C
509 527Right-handed alpha
Helix 21
21
C
529 544Right-handed alpha
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There are no sheets in PDB entry 3D1B
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il