Analysis of interatomic Contacts of Structural Units in PDB entry:
3D1D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3D1D entry

There are 6 chains in PDB entry 3D1D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 436GLU 544
B
 ASN 436GLU 544
C
 ASN 436GLU 544
D
 ASN 436GLU 544
E
 ASN 436GLU 544
F
 ASN 436GLU 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3D1D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
436 446Right-handed alpha
Helix 2
2
A
446 451Right-handed alpha
Helix 3
3
A
452 468Right-handed alpha
Helix 4
4
A
472 483Right-handed alpha
Helix 5
5
A
494 507Right-handed alpha
Helix 6
6
A
509 527Right-handed alpha
Helix 7
7
A
529 544Right-handed alpha
Helix 8
8
B
436 446Right-handed alpha
Helix 9
9
B
446 452Right-handed alpha
Helix 10
10
B
452 468Right-handed alpha
Helix 11
11
B
472 482Right-handed alpha
Helix 12
12
B
494 507Right-handed alpha
Helix 13
13
B
509 527Right-handed alpha
Helix 14
14
B
529 544Right-handed alpha
Helix 15
15
C
438 446Right-handed alpha
Helix 16
16
C
446 451Right-handed alpha
Helix 17
17
C
452 468Right-handed alpha
Helix 18
18
C
472 483Right-handed alpha
Helix 19
19
C
494 507Right-handed alpha
Helix 20
20
C
509 527Right-handed alpha
Helix 21
21
C
529 544Right-handed alpha
Helix 22
22
D
436 444Right-handed alpha
Helix 23
23
D
446 451Right-handed alpha
Helix 24
24
D
452 468Right-handed alpha
Helix 25
25
D
472 484Right-handed alpha
Helix 26
26
D
494 507Right-handed alpha
Helix 27
27
D
509 527Right-handed alpha
Helix 28
28
D
529 544Right-handed alpha
Helix 29
29
E
436 446Right-handed alpha
Helix 30
30
E
446 451Right-handed alpha
Helix 31
31
E
452 468Right-handed alpha
Helix 32
32
E
472 483Right-handed alpha
Helix 33
33
E
494 508Right-handed alpha
Helix 34
34
E
509 527Right-handed alpha
Helix 35
35
E
529 544Right-handed alpha
Helix 36
36
F
437 445Right-handed alpha
Helix 37
37
F
446 451Right-handed alpha
Helix 38
38
F
452 468Right-handed alpha
Helix 39
39
F
472 482Right-handed alpha
Helix 40
40
F
494 507Right-handed alpha
Helix 41
41
F
509 527Right-handed alpha
Helix 42
42
F
529 543Right-handed alpha
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There are no sheets in PDB entry 3D1D
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