Analysis of interatomic Contacts of Structural Units in PDB entry:
3D1N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3D1N entry

There are 16 chains in PDB entry 3D1N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 A 1 A 14
B
 T 1 T 14
C
 A 1 A 14
D
 T 1 T 14
E
 A 1 A 14
F
 T 1 T 14
G
 A 1 A 14
H
 T 1 T 14
I
 ASN 143THR 292
J
 ILE 142VAL 227
K
 ASN 143THR 292
L
 ASN 143GLN 287
M
 ASN 143THR 292
N
 ASN 143VAL 227
O
 ASN 143THR 292
P
 ASN 143MSE 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 3D1N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
I
143 160Right-handed alpha
Helix 2
2
I
164 173Right-handed alpha
Helix 3
3
I
181 190Right-handed alpha
Helix 4
4
I
194 219Right-handed alpha
Helix 5
5
I
222 228Right-handed alpha
Helix 6
6
I
242 256Right-handed alpha
Helix 7
7
I
260 272Right-handed alpha
Helix 8
8
I
274 290Right-handed alpha
Helix 9
9
J
143 161Right-handed alpha
Helix 10
10
J
164 177Right-handed alpha
Helix 11
11
J
178 180Right-handed 310
Helix 12
12
J
181 191Right-handed alpha
Helix 13
13
J
194 218Right-handed alpha
Helix 14
14
J
219 227Right-handed alpha
Helix 15
15
K
144 160Right-handed alpha
Helix 16
16
K
164 173Right-handed alpha
Helix 17
17
K
181 191Right-handed alpha
Helix 18
18
K
194 215Right-handed alpha
Helix 19
19
K
219 228Right-handed alpha
Helix 20
20
K
242 256Right-handed alpha
Helix 21
21
K
260 271Right-handed alpha
Helix 22
22
K
274 287Right-handed alpha
Helix 23
23
L
143 161Right-handed alpha
Helix 24
24
L
164 176Right-handed alpha
Helix 25
25
L
177 180Right-handed 310
Helix 26
26
L
181 191Right-handed alpha
Helix 27
27
L
194 218Right-handed alpha
Helix 28
28
L
221 228Right-handed alpha
Helix 29
29
L
242 256Right-handed alpha
Helix 30
30
L
260 272Right-handed alpha
Helix 31
31
L
274 287Right-handed alpha
Helix 32
32
M
143 161Right-handed alpha
Helix 33
33
M
164 173Right-handed alpha
Helix 34
34
M
181 190Right-handed alpha
Helix 35
35
M
194 219Right-handed alpha
Helix 36
36
M
219 228Right-handed alpha
Helix 37
37
M
242 256Right-handed alpha
Helix 38
38
M
260 271Right-handed alpha
Helix 39
39
M
274 291Right-handed alpha
Helix 40
40
N
143 161Right-handed alpha
Helix 41
41
N
164 177Right-handed alpha
Helix 42
42
N
178 180Right-handed 310
Helix 43
43
N
181 190Right-handed alpha
Helix 44
44
N
194 216Right-handed alpha
Helix 45
45
N
219 227Right-handed alpha
Helix 46
46
O
143 160Right-handed alpha
Helix 47
47
O
164 173Right-handed alpha
Helix 48
48
O
181 190Right-handed alpha
Helix 49
49
O
194 217Right-handed alpha
Helix 50
50
O
219 228Right-handed alpha
Helix 51
51
O
242 256Right-handed alpha
Helix 52
52
O
260 270Right-handed alpha
Helix 53
53
O
274 290Right-handed alpha
Helix 54
54
P
143 161Right-handed alpha
Helix 55
55
P
164 177Right-handed alpha
Helix 56
56
P
178 180Right-handed 310
Helix 57
57
P
181 190Right-handed alpha
Helix 58
58
P
194 218Right-handed alpha
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There are no sheets in PDB entry 3D1N
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