Analysis of interatomic Contacts of Structural Units in PDB entry:
3D3M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3D3M entry

There are 2 chains in PDB entry 3D3M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 730ALA 897
B
 LEU 730GLU 895
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3D3M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
730 744Right-handed alpha
Helix 2
2
A
746 758Right-handed alpha
Helix 3
3
A
759 764Right-handed 310
Helix 4
4
A
765 785Right-handed alpha
Helix 5
5
A
798 821Right-handed alpha
Helix 6
6
A
823 841Right-handed alpha
Helix 7
7
A
846 858Right-handed alpha
Helix 8
8
A
862 872Right-handed alpha
Helix 9
9
A
879 896Right-handed alpha
Helix 10
10
B
730 744Right-handed alpha
Helix 11
11
B
746 758Right-handed alpha
Helix 12
12
B
761 764Right-handed 310
Helix 13
13
B
765 785Right-handed alpha
Helix 14
14
B
798 821Right-handed alpha
Helix 15
15
B
823 840Right-handed alpha
Helix 16
16
B
846 858Right-handed alpha
Helix 17
17
B
862 872Right-handed alpha
Helix 18
18
B
879 895Right-handed alpha
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There are no sheets in PDB entry 3D3M
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il