Analysis of interatomic Contacts of Structural Units in PDB entry:
3D64


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3D64 entry

There are 2 chains in PDB entry 3D64 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 12TYR 473
B
 GLN 12TYR 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 3D64. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 20Right-handed 310
Helix 2
2
A
21 33Right-handed alpha
Helix 3
3
A
36 46Right-handed alpha
Helix 4
4
A
64 77Right-handed alpha
Helix 5
5
A
92 102Right-handed alpha
Helix 6
6
A
113 124Right-handed alpha
Helix 7
7
A
141 156Right-handed alpha
Helix 8
8
A
157 161Right-handed 310
Helix 9
9
A
165 180Right-handed alpha
Helix 10
10
A
186 191Right-handed alpha
Helix 11
11
A
200 213Right-handed alpha
Helix 12
12
A
226 240Right-handed alpha
Helix 13
13
A
241 251Right-handed alpha
Helix 14
14
A
265 277Right-handed alpha
Helix 15
15
A
288 297Right-handed alpha
Helix 16
16
A
304 309Right-handed alpha
Helix 17
17
A
326 333Right-handed alpha
Helix 18
18
A
351 355Right-handed 310
Helix 19
19
A
382 384Right-handed 310
Helix 20
20
A
385 390Right-handed alpha
Helix 21
21
A
395 417Right-handed alpha
Helix 22
22
A
418 420Right-handed 310
Helix 23
23
A
428 441Right-handed alpha
Helix 24
24
A
451 459Right-handed alpha
Helix 25
25
B
18 20Right-handed 310
Helix 26
26
B
21 33Right-handed alpha
Helix 27
27
B
36 46Right-handed alpha
Helix 28
28
B
64 77Right-handed alpha
Helix 29
29
B
92 102Right-handed alpha
Helix 30
30
B
113 124Right-handed alpha
Helix 31
31
B
141 154Right-handed alpha
Helix 32
32
B
156 161Right-handed 310
Helix 33
33
B
165 182Right-handed alpha
Helix 34
34
B
184 191Right-handed alpha
Helix 35
35
B
200 213Right-handed alpha
Helix 36
36
B
226 251Right-handed alpha
Helix 37
37
B
265 277Right-handed alpha
Helix 38
38
B
288 298Right-handed alpha
Helix 39
39
B
304 309Right-handed alpha
Helix 40
40
B
326 333Right-handed alpha
Helix 41
41
B
351 355Right-handed 310
Helix 42
42
B
382 384Right-handed 310
Helix 43
43
B
385 390Right-handed alpha
Helix 44
44
B
395 417Right-handed alpha
Helix 45
45
B
418 420Right-handed 310
Helix 46
46
B
428 438Right-handed alpha
Helix 47
47
B
439 444Right-handed alpha
Helix 48
48
B
451 459Right-handed alpha
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There are 4 sheets in PDB entry 3D64. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
80 84parallel
Strand 3
A
56 60parallel
Strand 4
A
135 138parallel
Strand 5
A
196 198parallel
Strand 6
A
220 222parallel
Strand 7
A
424 426parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
281 285parallel
Strand 3
A
258 262parallel
Strand 4
A
314 317parallel
Strand 5
A
337 341parallel
Strand 6
A
376 380parallel
Strand 7
A
366 370anti-parallel
Strand 8
A
358 363anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
80 84parallel
Strand 3
B
56 60parallel
Strand 4
B
135 138parallel
Strand 5
B
195 198parallel
Strand 6
B
220 222parallel
Strand 7
B
424 426parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 302first strand
Strand 2
B
281 285parallel
Strand 3
B
258 262parallel
Strand 4
B
314 317parallel
Strand 5
B
337 341parallel
Strand 6
B
376 380parallel
Strand 7
B
366 370anti-parallel
Strand 8
B
358 363anti-parallel
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