Analysis of interatomic Contacts of Structural Units in PDB entry:
3DMN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DMN entry

There is 1 chain in PDB entry 3DMN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 596GLU 765
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3DMN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
601 610Right-handed alpha
Helix 2
2
A
635 653Right-handed alpha
Helix 3
3
A
663 676Right-handed alpha
Helix 4
4
A
701 703Right-handed 310
Helix 5
5
A
723 725Right-handed 310
Helix 6
6
A
726 735Right-handed alpha
Helix 7
7
A
750 754Right-handed 310
Helix 8
8
A
757 761Right-handed 310
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There is 1 sheet ( A) in PDB entry 3DMN.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 683first strand
Strand 2
A
695 699parallel
Strand 3
A
657 661parallel
Strand 4
A
708 714parallel
Strand 5
A
737 746parallel
Strand 6
A
629 633parallel
Strand 7
A
762 763parallel
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