Analysis of interatomic Contacts of Structural Units in PDB entry:
3DS8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DS8 entry

There is 1 chain in PDB entry 3DS8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LYS 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3DS8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 29Right-handed alpha
Helix 2
2
A
72 92Right-handed alpha
Helix 3
3
A
102 115Right-handed alpha
Helix 4
4
A
138 143Right-handed alpha
Helix 5
5
A
155 164Right-handed alpha
Helix 6
6
A
165 168Right-handed 310
Helix 7
7
A
192 197Right-handed alpha
Helix 8
8
A
198 202Right-handed 310
Helix 9
9
A
218 227Right-handed 310
Helix 10
10
A
228 241Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3DS8.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
36 42anti-parallel
Strand 3
A
61 66parallel
Strand 4
A
6 9parallel
Strand 5
A
95 101parallel
Strand 6
A
123 130parallel
Strand 7
A
173 180parallel
Strand 8
A
209 216parallel
Strand 9
A
248 250parallel
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