Analysis of interatomic Contacts of Structural Units in PDB entry:
3DTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DTZ entry

There are 5 chains in PDB entry 3DTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 224
B
 MSE 1LEU 224
C
 THR 2LEU 224
D
 THR 2LEU 224
E
 THR 2LEU 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 3DTZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 41Right-handed alpha
Helix 2
2
A
67 83Right-handed alpha
Helix 3
3
A
98 104Right-handed alpha
Helix 4
4
A
107 113Right-handed alpha
Helix 5
5
A
128 133Right-handed alpha
Helix 6
6
A
135 149Right-handed alpha
Helix 7
7
A
182 194Right-handed alpha
Helix 8
8
A
195 200Right-handed 310
Helix 9
9
A
218 224Right-handed alpha
Helix 10
10
B
20 41Right-handed alpha
Helix 11
11
B
67 83Right-handed alpha
Helix 12
12
B
107 114Right-handed alpha
Helix 13
13
B
128 134Right-handed alpha
Helix 14
14
B
135 152Right-handed alpha
Helix 15
15
B
153 157Right-handed 310
Helix 16
16
B
182 194Right-handed alpha
Helix 17
17
B
195 200Right-handed 310
Helix 18
18
B
218 224Right-handed alpha
Helix 19
19
C
20 40Right-handed alpha
Helix 20
20
C
67 83Right-handed alpha
Helix 21
21
C
107 113Right-handed alpha
Helix 22
22
C
128 133Right-handed alpha
Helix 23
23
C
135 152Right-handed alpha
Helix 24
24
C
182 194Right-handed alpha
Helix 25
25
C
195 200Right-handed 310
Helix 26
26
C
215 217Right-handed 310
Helix 27
27
C
218 224Right-handed alpha
Helix 28
28
D
20 41Right-handed alpha
Helix 29
29
D
67 83Right-handed alpha
Helix 30
30
D
98 103Right-handed alpha
Helix 31
31
D
107 113Right-handed alpha
Helix 32
32
D
128 134Right-handed alpha
Helix 33
33
D
135 153Right-handed alpha
Helix 34
34
D
154 157Right-handed 310
Helix 35
35
D
182 194Right-handed alpha
Helix 36
36
D
195 200Right-handed 310
Helix 37
37
D
218 224Right-handed alpha
Helix 38
38
E
20 41Right-handed alpha
Helix 39
39
E
67 83Right-handed alpha
Helix 40
40
E
98 104Right-handed alpha
Helix 41
41
E
107 113Right-handed alpha
Helix 42
42
E
128 134Right-handed alpha
Helix 43
43
E
135 152Right-handed alpha
Helix 44
44
E
153 157Right-handed 310
Helix 45
45
E
182 194Right-handed alpha
Helix 46
46
E
195 200Right-handed 310
Helix 47
47
E
218 224Right-handed alpha
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There are 6 sheets in PDB entry 3DTZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
119 127anti-parallel
Strand 3
A
209 214anti-parallel
Strand 4
A
44 52anti-parallel
Strand 5
A
59 65anti-parallel
Strand 6
A
5 13anti-parallel
Strand 7
A
86 96anti-parallel
Strand 8
A
160 165anti-parallel
Strand 9
A
174 180anti-parallel
Strand 10
A
119 127anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 91first strand
Strand 2
B
5 13anti-parallel
Strand 3
B
59 65anti-parallel
Strand 4
B
46 52anti-parallel
Strand 5
B
209 214anti-parallel
Strand 6
B
119 127anti-parallel
Strand 7
B
202 203anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 91first strand
Strand 2
B
5 13anti-parallel
Strand 3
B
94 96anti-parallel
Strand 4
B
160 165anti-parallel
Strand 5
B
174 180anti-parallel
Strand 6
B
119 127anti-parallel
Strand 7
B
202 203anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 204first strand
Strand 2
C
119 127anti-parallel
Strand 3
C
209 214anti-parallel
Strand 4
C
46 52anti-parallel
Strand 5
C
59 65anti-parallel
Strand 6
C
5 13anti-parallel
Strand 7
C
86 96anti-parallel
Strand 8
C
160 165anti-parallel
Strand 9
C
174 180anti-parallel
Strand 10
C
119 127anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
202 203first strand
Strand 2
D
119 127anti-parallel
Strand 3
D
209 214anti-parallel
Strand 4
D
44 52anti-parallel
Strand 5
D
59 65anti-parallel
Strand 6
D
5 13anti-parallel
Strand 7
D
86 96anti-parallel
Strand 8
D
160 165anti-parallel
Strand 9
D
174 180anti-parallel
Strand 10
D
119 127anti-parallel
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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
202 203first strand
Strand 2
E
119 127anti-parallel
Strand 3
E
209 214anti-parallel
Strand 4
E
44 52anti-parallel
Strand 5
E
59 65anti-parallel
Strand 6
E
5 13anti-parallel
Strand 7
E
86 96anti-parallel
Strand 8
E
160 165anti-parallel
Strand 9
E
174 180anti-parallel
Strand 10
E
119 127anti-parallel
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