Analysis of interatomic Contacts of Structural Units in PDB entry:
3DVU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DVU entry

There are 4 chains in PDB entry 3DVU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5LEU 134
B
 LYS 5GLU 135
C
 GLY 106GLN 129
D
 ASP 105GLY 128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3DVU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 22Right-handed alpha
Helix 2
2
A
31 56Right-handed alpha
Helix 3
3
A
60 65Right-handed 310
Helix 4
4
A
66 79Right-handed alpha
Helix 5
5
A
84 101Right-handed alpha
Helix 6
6
A
109 126Right-handed alpha
Helix 7
7
A
127 131Right-handed 310
Helix 8
8
B
6 22Right-handed alpha
Helix 9
9
B
34 57Right-handed alpha
Helix 10
10
B
60 65Right-handed 310
Helix 11
11
B
66 79Right-handed alpha
Helix 12
12
B
84 102Right-handed alpha
Helix 13
13
B
109 126Right-handed alpha
Helix 14
14
C
106 124Right-handed alpha
Helix 15
15
D
107 125Right-handed alpha
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There are no sheets in PDB entry 3DVU
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