Analysis of interatomic Contacts of Structural Units in PDB entry:
3DZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DZC entry

There are 2 chains in PDB entry 3DZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 372
B
 ALA 0LYS 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3DZC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 27Right-handed alpha
Helix 2
2
A
41 51Right-handed alpha
Helix 3
3
A
67 87Right-handed alpha
Helix 4
4
A
97 109Right-handed alpha
Helix 5
5
A
131 142Right-handed alpha
Helix 6
6
A
150 160Right-handed alpha
Helix 7
7
A
163 165Right-handed 310
Helix 8
8
A
172 188Right-handed alpha
Helix 9
9
A
188 198Right-handed alpha
Helix 10
10
A
221 237Right-handed alpha
Helix 11
11
A
249 260Right-handed alpha
Helix 12
12
A
273 284Right-handed alpha
Helix 13
13
A
292 296Right-handed 310
Helix 14
14
A
297 302Right-handed 310
Helix 15
15
A
314 320Right-handed alpha
Helix 16
16
A
329 343Right-handed alpha
Helix 17
17
A
343 352Right-handed alpha
Helix 18
18
A
361 372Right-handed alpha
Helix 19
19
B
10 26Right-handed alpha
Helix 20
20
B
40 51Right-handed alpha
Helix 21
21
B
67 87Right-handed alpha
Helix 22
22
B
97 110Right-handed alpha
Helix 23
23
B
131 142Right-handed alpha
Helix 24
24
B
150 160Right-handed alpha
Helix 25
25
B
163 165Right-handed 310
Helix 26
26
B
172 188Right-handed alpha
Helix 27
27
B
188 197Right-handed alpha
Helix 28
28
B
220 237Right-handed alpha
Helix 29
29
B
249 260Right-handed alpha
Helix 30
30
B
273 284Right-handed alpha
Helix 31
31
B
293 298Right-handed alpha
Helix 32
32
B
299 302Right-handed 310
Helix 33
33
B
314 320Right-handed alpha
Helix 34
34
B
329 343Right-handed alpha
Helix 35
35
B
343 352Right-handed alpha
Helix 36
36
B
361 372Right-handed alpha
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There are 4 sheets in PDB entry 3DZC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
30 36parallel
Strand 3
A
2 8parallel
Strand 4
A
90 94parallel
Strand 5
A
114 117parallel
Strand 6
A
145 148parallel
Strand 7
A
167 169parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
240 245parallel
Strand 3
A
207 212parallel
Strand 4
A
286 289parallel
Strand 5
A
305 307parallel
Strand 6
A
323 325parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 58first strand
Strand 2
B
30 36parallel
Strand 3
B
2 8parallel
Strand 4
B
90 94parallel
Strand 5
B
114 117parallel
Strand 6
B
145 148parallel
Strand 7
B
167 169parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 269first strand
Strand 2
B
240 245parallel
Strand 3
B
207 212parallel
Strand 4
B
286 289parallel
Strand 5
B
305 307parallel
Strand 6
B
323 325parallel
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