Analysis of interatomic Contacts of Structural Units in PDB entry:
3DZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DZE entry

There is 1 chain in PDB entry 3DZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LYS 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3DZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 11Right-handed alpha
Helix 2
2
A
13 21Right-handed alpha
Helix 3
3
A
21 33Right-handed alpha
Helix 4
4
A
48 52Right-handed 310
Helix 5
5
A
73 81Right-handed 310
Helix 6
6
A
98 107Right-handed alpha
Helix 7
7
A
108 115Right-handed alpha
Helix 8
8
A
127 134Right-handed alpha
Helix 9
9
A
135 137Right-handed 310
Helix 10
10
A
153 165Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3DZE.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
62 68anti-parallel
Strand 3
A
88 92parallel
Strand 4
A
117 121parallel
Strand 5
A
142 146parallel
Strand 6
A
169 173parallel
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