Analysis of interatomic Contacts of Structural Units in PDB entry:
3DZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DZV entry

There are 2 chains in PDB entry 3DZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 272
B
 MSE 1LEU 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3DZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 10Right-handed 310
Helix 2
2
A
27 38Right-handed alpha
Helix 3
3
A
47 49Right-handed 310
Helix 4
4
A
50 56Right-handed alpha
Helix 5
5
A
69 86Right-handed alpha
Helix 6
6
A
100 113Right-handed alpha
Helix 7
7
A
122 129Right-handed alpha
Helix 8
8
A
142 145Right-handed 310
Helix 9
9
A
146 164Right-handed alpha
Helix 10
10
A
191 196Right-handed 310
Helix 11
11
A
199 215Right-handed alpha
Helix 12
12
A
217 240Right-handed alpha
Helix 13
13
A
242 257Right-handed alpha
Helix 14
14
A
258 260Right-handed 310
Helix 15
15
A
262 267Right-handed 310
Helix 16
16
B
6 10Right-handed 310
Helix 17
17
B
27 38Right-handed alpha
Helix 18
18
B
47 49Right-handed 310
Helix 19
19
B
50 58Right-handed alpha
Helix 20
20
B
69 87Right-handed alpha
Helix 21
21
B
100 113Right-handed alpha
Helix 22
22
B
122 129Right-handed alpha
Helix 23
23
B
142 145Right-handed 310
Helix 24
24
B
146 164Right-handed alpha
Helix 25
25
B
191 196Right-handed 310
Helix 26
26
B
199 215Right-handed alpha
Helix 27
27
B
217 240Right-handed alpha
Helix 28
28
B
242 257Right-handed alpha
Helix 29
29
B
258 260Right-handed 310
Helix 30
30
B
262 267Right-handed 310
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There are 2 sheets in PDB entry 3DZV. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
A
18 22parallel
Strand 3
A
60 64parallel
Strand 4
A
90 93parallel
Strand 5
A
117 121parallel
Strand 6
A
168 172parallel
Strand 7
A
176 179anti-parallel
Strand 8
A
184 187anti-parallel
Strand 9
A
269 272anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 43first strand
Strand 2
B
18 22parallel
Strand 3
B
60 64parallel
Strand 4
B
90 93parallel
Strand 5
B
117 121parallel
Strand 6
B
168 172parallel
Strand 7
B
176 179anti-parallel
Strand 8
B
184 187anti-parallel
Strand 9
B
269 271anti-parallel
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