Analysis of interatomic Contacts of Structural Units in PDB entry:
3E03


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E03 entry

There are 3 chains in PDB entry 3E03 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLY 275
B
 THR 4GLU 274
C
 LEU 3GLU 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3E03. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
50 62Right-handed alpha
Helix 3
3
A
74 90Right-handed alpha
Helix 4
4
A
106 110Right-handed 310
Helix 5
5
A
111 122Right-handed alpha
Helix 6
6
A
122 138Right-handed alpha
Helix 7
7
A
155 162Right-handed alpha
Helix 8
8
A
162 184Right-handed alpha
Helix 9
9
A
185 187Right-handed 310
Helix 10
10
A
211 215Right-handed 310
Helix 11
11
A
218 230Right-handed alpha
Helix 12
12
A
243 250Right-handed alpha
Helix 13
13
A
255 259Right-handed 310
Helix 14
14
B
17 30Right-handed alpha
Helix 15
15
B
50 62Right-handed alpha
Helix 16
16
B
74 90Right-handed alpha
Helix 17
17
B
106 110Right-handed 310
Helix 18
18
B
111 122Right-handed alpha
Helix 19
19
B
122 138Right-handed alpha
Helix 20
20
B
155 162Right-handed alpha
Helix 21
21
B
162 184Right-handed alpha
Helix 22
22
B
185 187Right-handed 310
Helix 23
23
B
201 207Right-handed 310
Helix 24
24
B
211 215Right-handed 310
Helix 25
25
B
218 230Right-handed alpha
Helix 26
26
B
243 250Right-handed alpha
Helix 27
27
B
255 259Right-handed 310
Helix 28
28
C
17 30Right-handed alpha
Helix 29
29
C
50 62Right-handed alpha
Helix 30
30
C
74 90Right-handed alpha
Helix 31
31
C
106 110Right-handed 310
Helix 32
32
C
111 122Right-handed alpha
Helix 33
33
C
122 138Right-handed alpha
Helix 34
34
C
155 162Right-handed alpha
Helix 35
35
C
162 184Right-handed alpha
Helix 36
36
C
185 187Right-handed 310
Helix 37
37
C
201 207Right-handed 310
Helix 38
38
C
211 215Right-handed 310
Helix 39
39
C
218 230Right-handed alpha
Helix 40
40
C
243 250Right-handed alpha
Helix 41
41
C
255 259Right-handed 310
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There are 3 sheets in PDB entry 3E03. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
33 38parallel
Strand 3
A
9 13parallel
Strand 4
A
94 97parallel
Strand 5
A
144 147parallel
Strand 6
A
189 194parallel
Strand 7
A
240 242parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 69first strand
Strand 2
B
33 38parallel
Strand 3
B
9 13parallel
Strand 4
B
94 97parallel
Strand 5
B
144 148parallel
Strand 6
B
189 194parallel
Strand 7
B
240 242parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 69first strand
Strand 2
C
33 38parallel
Strand 3
C
9 13parallel
Strand 4
C
94 97parallel
Strand 5
C
144 147parallel
Strand 6
C
189 194parallel
Strand 7
C
240 242parallel
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