Analysis of interatomic Contacts of Structural Units in PDB entry:
3E0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E0F entry

There is 1 chain in PDB entry 3E0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8ARG 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3E0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
54 66Right-handed alpha
Helix 3
3
A
95 121Right-handed alpha
Helix 4
4
A
127 133Right-handed alpha
Helix 5
5
A
137 141Right-handed 310
Helix 6
6
A
144 155Right-handed alpha
Helix 7
7
A
160 166Right-handed alpha
Helix 8
8
A
183 194Right-handed alpha
Helix 9
9
A
214 225Right-handed alpha
Helix 10
10
A
237 252Right-handed alpha
Helix 11
11
A
262 266Right-handed 310
Helix 12
12
A
276 287Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3E0F.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 18first strand
Strand 2
A
43 49parallel
Strand 3
A
69 79parallel
Strand 4
A
82 89anti-parallel
Strand 5
A
197 201anti-parallel
Strand 6
A
228 232parallel
Strand 7
A
254 257parallel
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