Analysis of interatomic Contacts of Structural Units in PDB entry:
3E0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E0R entry

There are 4 chains in PDB entry 3E0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3VAL 241
B
 ASN 2VAL 241
C
 ASN 4VAL 241
D
 ASN 2VAL 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3E0R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 26Right-handed alpha
Helix 2
2
A
80 89Right-handed alpha
Helix 3
3
A
123 127Right-handed 310
Helix 4
4
A
165 170Right-handed alpha
Helix 5
5
A
204 212Right-handed alpha
Helix 6
6
B
17 27Right-handed alpha
Helix 7
7
B
58 62Right-handed 310
Helix 8
8
B
80 91Right-handed alpha
Helix 9
9
B
123 127Right-handed 310
Helix 10
10
B
165 170Right-handed alpha
Helix 11
11
B
180 184Right-handed 310
Helix 12
12
B
204 213Right-handed alpha
Helix 13
13
C
17 26Right-handed alpha
Helix 14
14
C
80 91Right-handed alpha
Helix 15
15
C
123 127Right-handed 310
Helix 16
16
C
165 170Right-handed alpha
Helix 17
17
C
204 212Right-handed alpha
Helix 18
18
D
17 26Right-handed alpha
Helix 19
19
D
80 90Right-handed alpha
Helix 20
20
D
123 127Right-handed 310
Helix 21
21
D
165 170Right-handed alpha
Helix 22
22
D
180 184Right-handed 310
Helix 23
23
D
204 212Right-handed alpha
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There are 8 sheets in PDB entry 3E0R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 36first strand
Strand 2
A
40 44anti-parallel
Strand 3
A
50 56anti-parallel
Strand 4
A
6 15parallel
Strand 5
A
193 200anti-parallel
Strand 6
A
235 240parallel
Strand 7
A
225 229anti-parallel
Strand 8
A
217 218anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 129first strand
Strand 2
A
96 99anti-parallel
Strand 3
A
104 109anti-parallel
Strand 4
A
115 119anti-parallel
Strand 5
A
71 78parallel
Strand 6
A
148 156anti-parallel
Strand 7
A
173 177parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
40 44anti-parallel
Strand 3
B
50 56anti-parallel
Strand 4
B
6 15parallel
Strand 5
B
193 200anti-parallel
Strand 6
B
235 240parallel
Strand 7
B
226 229anti-parallel
Strand 8
B
217 218anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 129first strand
Strand 2
B
96 99anti-parallel
Strand 3
B
104 109anti-parallel
Strand 4
B
115 119anti-parallel
Strand 5
B
71 78parallel
Strand 6
B
148 156anti-parallel
Strand 7
B
173 177parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
40 44anti-parallel
Strand 3
C
50 56anti-parallel
Strand 4
C
6 15parallel
Strand 5
C
193 200anti-parallel
Strand 6
C
235 240parallel
Strand 7
C
225 229anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
128 129first strand
Strand 2
C
96 99anti-parallel
Strand 3
C
104 109anti-parallel
Strand 4
C
115 119anti-parallel
Strand 5
C
71 78parallel
Strand 6
C
148 156anti-parallel
Strand 7
C
173 177parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 37first strand
Strand 2
D
40 44anti-parallel
Strand 3
D
50 56anti-parallel
Strand 4
D
6 15parallel
Strand 5
D
193 200anti-parallel
Strand 6
D
235 240parallel
Strand 7
D
225 229anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 130first strand
Strand 2
D
96 99anti-parallel
Strand 3
D
104 109anti-parallel
Strand 4
D
115 119anti-parallel
Strand 5
D
71 78parallel
Strand 6
D
148 156anti-parallel
Strand 7
D
173 177parallel
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