Analysis of interatomic Contacts of Structural Units in PDB entry:
3E0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E0W entry

There is 1 chain in PDB entry 3E0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7GLU 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3E0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 44Right-handed alpha
Helix 2
2
A
56 75Right-handed alpha
Helix 3
3
A
112 116Right-handed 310
Helix 4
4
A
130 135Right-handed alpha
Helix 5
5
A
190 203Right-handed alpha
Helix 6
6
A
215 227Right-handed alpha
Helix 7
7
A
228 231Right-handed 310
Helix 8
8
A
241 247Right-handed alpha
Helix 9
9
A
247 253Right-handed alpha
Helix 10
10
A
270 272Right-handed 310
Helix 11
11
A
273 289Right-handed alpha
Helix 12
12
A
299 304Right-handed 310
Helix 13
13
A
309 323Right-handed alpha
Helix 14
14
A
330 335Right-handed alpha
Helix 15
15
A
338 353Right-handed alpha
Helix 16
16
A
361 369Right-handed alpha
Helix 17
17
A
375 392Right-handed alpha
Helix 18
18
A
403 412Right-handed alpha
Helix 19
19
A
424 431Right-handed alpha
Helix 20
20
A
432 434Right-handed 310
Helix 21
21
A
453 467Right-handed alpha
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There are 4 sheets in PDB entry 3E0W. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 26first strand
Strand 2
A
45 51parallel
Strand 3
A
79 83parallel
Strand 4
A
207 210parallel
Strand 5
A
234 238parallel
Strand 6
A
258 260parallel
Strand 7
A
292 294parallel
Strand 8
A
326 329parallel
Strand 9
A
22 26parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
169 172anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 125first strand
Strand 2
A
106 110parallel
Strand 3
A
160 165anti-parallel
Strand 4
A
148 157anti-parallel
Strand 5
A
140 143anti-parallel
Strand 6
A
177 178anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 441first strand
Strand 2
A
418 422parallel
Strand 3
A
396 399parallel
Strand 4
A
475 480parallel
Strand 5
A
491 496anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il