Analysis of interatomic Contacts of Structural Units in PDB entry:
3E0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E0Y entry

There are 2 chains in PDB entry 3E0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 75ARG 238
B
 GLU 74ARG 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3E0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
80 89Right-handed alpha
Helix 2
2
A
93 109Right-handed alpha
Helix 3
3
A
133 137Right-handed 310
Helix 4
4
A
148 156Right-handed alpha
Helix 5
5
A
210 237Right-handed alpha
Helix 6
6
B
80 89Right-handed alpha
Helix 7
7
B
93 109Right-handed alpha
Helix 8
8
B
133 137Right-handed 310
Helix 9
9
B
147 156Right-handed alpha
Helix 10
10
B
210 235Right-handed alpha
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There are 2 sheets in PDB entry 3E0Y. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
123 130anti-parallel
Strand 3
A
114 120anti-parallel
Strand 4
A
195 203anti-parallel
Strand 5
A
181 190anti-parallel
Strand 6
A
159 164anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
123 130anti-parallel
Strand 3
B
113 120anti-parallel
Strand 4
B
195 202anti-parallel
Strand 5
B
182 190anti-parallel
Strand 6
B
159 163anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il