Analysis of interatomic Contacts of Structural Units in PDB entry:
3E1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E1H entry

There are 2 chains in PDB entry 3E1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8ASN 390
B
 GLY 8ASN 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3E1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 35Right-handed alpha
Helix 2
2
A
42 52Right-handed alpha
Helix 3
3
A
68 72Right-handed 310
Helix 4
4
A
78 90Right-handed alpha
Helix 5
5
A
90 106Right-handed alpha
Helix 6
6
A
108 112Right-handed 310
Helix 7
7
A
127 137Right-handed alpha
Helix 8
8
A
150 152Right-handed 310
Helix 9
9
A
153 172Right-handed alpha
Helix 10
10
A
186 188Right-handed 310
Helix 11
11
A
189 201Right-handed alpha
Helix 12
12
A
205 210Right-handed alpha
Helix 13
13
A
266 287Right-handed alpha
Helix 14
14
A
288 290Right-handed 310
Helix 15
15
A
296 300Right-handed 310
Helix 16
16
A
308 320Right-handed alpha
Helix 17
17
A
322 325Right-handed 310
Helix 18
18
A
326 337Right-handed alpha
Helix 19
19
A
339 341Right-handed 310
Helix 20
20
A
342 352Right-handed alpha
Helix 21
21
B
30 36Right-handed alpha
Helix 22
22
B
37 39Right-handed 310
Helix 23
23
B
42 52Right-handed alpha
Helix 24
24
B
53 55Right-handed 310
Helix 25
25
B
68 72Right-handed 310
Helix 26
26
B
78 90Right-handed alpha
Helix 27
27
B
90 105Right-handed alpha
Helix 28
28
B
108 112Right-handed 310
Helix 29
29
B
127 137Right-handed alpha
Helix 30
30
B
150 152Right-handed 310
Helix 31
31
B
153 173Right-handed alpha
Helix 32
32
B
186 188Right-handed 310
Helix 33
33
B
189 201Right-handed alpha
Helix 34
34
B
205 209Right-handed 310
Helix 35
35
B
266 285Right-handed alpha
Helix 36
36
B
296 300Right-handed 310
Helix 37
37
B
308 319Right-handed alpha
Helix 38
38
B
322 325Right-handed 310
Helix 39
39
B
326 337Right-handed alpha
Helix 40
40
B
339 341Right-handed 310
Helix 41
41
B
342 352Right-handed alpha
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There are 4 sheets in PDB entry 3E1H. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
114 118parallel
Strand 3
A
177 184parallel
Strand 4
A
213 220anti-parallel
Strand 5
A
12 20anti-parallel
Strand 6
A
233 242anti-parallel
Strand 7
A
379 387anti-parallel
Strand 8
A
368 375anti-parallel
Strand 9
A
301 304parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 263first strand
Strand 2
A
250 255anti-parallel
Strand 3
B
124 125anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 147first strand
Strand 2
B
114 118parallel
Strand 3
B
177 184parallel
Strand 4
B
213 220anti-parallel
Strand 5
B
13 20anti-parallel
Strand 6
B
233 242anti-parallel
Strand 7
B
379 387anti-parallel
Strand 8
B
368 375anti-parallel
Strand 9
B
301 304parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 255first strand
Strand 2
B
258 263anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il