Analysis of interatomic Contacts of Structural Units in PDB entry:
3E2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E2V entry

There are 2 chains in PDB entry 3E2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 35GLY 417
B
 PRO 35PHE 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3E2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
47 51Right-handed 310
Helix 2
2
A
63 74Right-handed alpha
Helix 3
3
A
85 100Right-handed alpha
Helix 4
4
A
114 122Right-handed 310
Helix 5
5
A
141 154Right-handed alpha
Helix 6
6
A
155 174Right-handed alpha
Helix 7
7
A
197 212Right-handed alpha
Helix 8
8
A
215 220Right-handed alpha
Helix 9
9
A
230 244Right-handed alpha
Helix 10
10
A
253 257Right-handed 310
Helix 11
11
A
282 293Right-handed alpha
Helix 12
12
A
301 306Right-handed 310
Helix 13
13
A
307 316Right-handed alpha
Helix 14
14
A
317 320Right-handed 310
Helix 15
15
A
339 350Right-handed alpha
Helix 16
16
A
361 369Right-handed 310
Helix 17
17
A
382 384Right-handed 310
Helix 18
18
A
385 398Right-handed alpha
Helix 19
19
A
400 417Right-handed alpha
Helix 20
20
B
47 51Right-handed 310
Helix 21
21
B
63 74Right-handed alpha
Helix 22
22
B
85 100Right-handed alpha
Helix 23
23
B
114 122Right-handed 310
Helix 24
24
B
141 154Right-handed alpha
Helix 25
25
B
155 174Right-handed alpha
Helix 26
26
B
197 212Right-handed alpha
Helix 27
27
B
215 220Right-handed alpha
Helix 28
28
B
230 244Right-handed alpha
Helix 29
29
B
253 257Right-handed 310
Helix 30
30
B
282 293Right-handed alpha
Helix 31
31
B
301 306Right-handed 310
Helix 32
32
B
307 316Right-handed alpha
Helix 33
33
B
317 320Right-handed 310
Helix 34
34
B
339 350Right-handed alpha
Helix 35
35
B
361 369Right-handed 310
Helix 36
36
B
382 384Right-handed 310
Helix 37
37
B
385 398Right-handed alpha
Helix 38
38
B
400 416Right-handed alpha
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There are 8 sheets in PDB entry 3E2V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
76 81parallel
Strand 3
A
106 111parallel
Strand 4
A
180 189parallel
Strand 5
A
223 228parallel
Strand 6
A
274 276parallel
Strand 7
A
296 300parallel
Strand 8
A
322 324parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
57 58anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
265 266anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
375 377parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 43first strand
Strand 2
B
76 81parallel
Strand 3
B
106 111parallel
Strand 4
B
180 189parallel
Strand 5
B
223 228parallel
Strand 6
B
274 277parallel
Strand 7
B
296 300parallel
Strand 8
B
322 324parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
57 58anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 246first strand
Strand 2
B
265 266anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 360first strand
Strand 2
B
375 377parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il