Analysis of interatomic Contacts of Structural Units in PDB entry:
3E35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E35 entry

There is 1 chain in PDB entry 3E35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3ALA 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3E35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 6Right-handed 310
Helix 2
2
A
11 25Right-handed alpha
Helix 3
3
A
40 42Right-handed 310
Helix 4
4
A
43 56Right-handed alpha
Helix 5
5
A
65 70Right-handed alpha
Helix 6
6
A
118 133Right-handed alpha
Helix 7
7
A
162 166Right-handed 310
Helix 8
8
A
181 193Right-handed alpha
Helix 9
9
A
207 209Right-handed 310
Helix 10
10
A
213 229Right-handed alpha
Helix 11
11
A
232 257Right-handed alpha
Helix 12
12
A
258 275Right-handed alpha
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There are 2 sheets in PDB entry 3E35. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
58 64anti-parallel
Strand 3
A
95 100anti-parallel
Strand 4
A
106 113anti-parallel
Strand 5
A
29 36parallel
Strand 6
A
135 146parallel
Strand 7
A
197 205parallel
Strand 8
A
156 160anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
85 89anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il