Analysis of interatomic Contacts of Structural Units in PDB entry:
3E3R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E3R entry

There are 2 chains in PDB entry 3E3R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -12LEU 189
B
 VAL 4LEU 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3E3R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 13Right-handed alpha
Helix 2
2
A
27 34Right-handed alpha
Helix 3
3
A
42 52Right-handed alpha
Helix 4
4
A
58 70Right-handed alpha
Helix 5
5
A
78 86Right-handed alpha
Helix 6
6
A
91 106Right-handed alpha
Helix 7
7
A
114 122Right-handed alpha
Helix 8
8
A
127 132Right-handed alpha
Helix 9
9
A
136 149Right-handed alpha
Helix 10
10
A
159 173Right-handed alpha
Helix 11
11
A
175 188Right-handed alpha
Helix 12
12
B
4 16Right-handed alpha
Helix 13
13
B
23 34Right-handed alpha
Helix 14
14
B
42 52Right-handed alpha
Helix 15
15
B
58 70Right-handed alpha
Helix 16
16
B
79 87Right-handed alpha
Helix 17
17
B
91 106Right-handed alpha
Helix 18
18
B
136 149Right-handed alpha
Helix 19
19
B
158 166Right-handed alpha
Helix 20
20
B
166 173Right-handed alpha
Helix 21
21
B
175 188Right-handed alpha
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There are 2 sheets in PDB entry 3E3R. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
157 158anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 41first strand
Strand 2
B
77 78anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il