Analysis of interatomic Contacts of Structural Units in PDB entry:
3E58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E58 entry

There are 2 chains in PDB entry 3E58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ILE 211
B
 ASN -1ILE 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3E58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 31Right-handed alpha
Helix 2
2
A
39 44Right-handed alpha
Helix 3
3
A
47 50Right-handed 310
Helix 4
4
A
51 57Right-handed alpha
Helix 5
5
A
58 63Right-handed 310
Helix 6
6
A
64 79Right-handed alpha
Helix 7
7
A
82 87Right-handed alpha
Helix 8
8
A
90 101Right-handed alpha
Helix 9
9
A
112 123Right-handed alpha
Helix 10
10
A
125 129Right-handed 310
Helix 11
11
A
136 138Right-handed 310
Helix 12
12
A
145 156Right-handed alpha
Helix 13
13
A
158 160Right-handed 310
Helix 14
14
A
168 178Right-handed alpha
Helix 15
15
A
203 211Right-handed 310
Helix 16
16
B
16 32Right-handed alpha
Helix 17
17
B
39 44Right-handed 310
Helix 18
18
B
51 57Right-handed alpha
Helix 19
19
B
58 63Right-handed 310
Helix 20
20
B
64 79Right-handed alpha
Helix 21
21
B
82 87Right-handed alpha
Helix 22
22
B
90 101Right-handed alpha
Helix 23
23
B
112 123Right-handed alpha
Helix 24
24
B
125 129Right-handed 310
Helix 25
25
B
136 138Right-handed 310
Helix 26
26
B
145 156Right-handed alpha
Helix 27
27
B
158 160Right-handed 310
Helix 28
28
B
168 178Right-handed alpha
Helix 29
29
B
203 211Right-handed 310
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There are 2 sheets in PDB entry 3E58. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 134first strand
Strand 2
A
104 109parallel
Strand 3
A
4 8parallel
Strand 4
A
162 166parallel
Strand 5
A
181 185parallel
Strand 6
A
199 201parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 134first strand
Strand 2
B
104 109parallel
Strand 3
B
4 8parallel
Strand 4
B
162 166parallel
Strand 5
B
181 185parallel
Strand 6
B
199 201parallel
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